Detailed information NTG0393597

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FIU99_RS00960
• Genome accession: NZ_CP045355
• Coordinates: 219435..220442 (+)
• Length: 335 a.a.
• NCBI ID: WP_006963339.1
• Uniprot ID: A0A097QNP8
• Organism: Vibrio sp. THAF64
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 214435..225442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FIU99_RS00940 (FIU99_00950)	metJ	214539..214859 (+)	321	WP_006963343.1	met regulon transcriptional regulator MetJ	-
FIU99_RS00945 (FIU99_00955)	-	214947..216224 (-)	1278	WP_006963342.1	malic enzyme-like NAD(P)-binding protein	-
FIU99_RS00950 (FIU99_00960)	rpmE	216476..216694 (-)	219	WP_006963341.1	50S ribosomal protein L31	-
FIU99_RS00955 (FIU99_00965)	priA	216985..219186 (+)	2202	WP_152471942.1	primosomal protein N'	-
FIU99_RS00960 (FIU99_00970)	cytR	219435..220442 (+)	1008	WP_006963339.1	DNA-binding transcriptional regulator CytR	Regulator
FIU99_RS00965 (FIU99_00975)	-	220557..221105 (+)	549	WP_029236296.1	SPOR domain-containing protein	-
FIU99_RS00970 (FIU99_00980)	hslV	221267..221812 (+)	546	WP_006963336.1	ATP-dependent protease subunit HslV	-
FIU99_RS00975 (FIU99_00985)	hslU	221850..223184 (+)	1335	WP_021457296.1	HslU--HslV peptidase ATPase subunit	-
FIU99_RS00980 (FIU99_00990)	-	223349..224032 (+)	684	WP_152471943.1	nitroreductase family protein	-
FIU99_RS00985 (FIU99_00995)	frdD	224091..224468 (-)	378	WP_152471944.1	fumarate reductase subunit FrdD	-
FIU99_RS00990 (FIU99_01000)	frdC	224481..224864 (-)	384	WP_152471945.1	fumarate reductase subunit FrdC	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36965.58 Da
• Isoelectric Point: 6.0455

>NTDB_id=393597 FIU99_RS00960 WP_006963339.1 219435..220442(+) (cytR) [Vibrio sp. THAF64]
MATMKDVAQLAGVSTATVSRALMNPEKVSSATRKRVEDAVLEAGYSPNSLARNLRRNESKTIIAIIPDICDPYYTEIIRG
IEDAAMEHGYIVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRIAQISGPSSAVLCQFRYQGYQQALRRAGISMNPNYCIYGDFSFEDGAKAVRQLLALPEPPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TQLVVRESAAPPRVI

Nucleotide

• Length: 1008 bp

>NTDB_id=393597 FIU99_RS00960 WP_006963339.1 219435..220442(+) (cytR) [Vibrio sp. THAF64]
ATGGCGACAATGAAGGATGTTGCTCAGCTAGCAGGCGTTTCAACTGCAACAGTATCGCGTGCTCTAATGAACCCGGAAAA
AGTATCTTCAGCTACAAGGAAGCGAGTAGAAGATGCAGTATTAGAAGCCGGATATTCACCAAATTCTCTGGCGCGCAACC
TGCGCCGAAATGAGTCCAAAACCATAATTGCAATCATCCCGGATATTTGTGATCCCTACTACACAGAGATCATCCGTGGA
ATTGAAGACGCTGCGATGGAACATGGATACATCGTGCTGCTGGGAGACAGTGGTCAGCAGAAAAAGCGTGAGAGTTCTTT
TGTCAATCTTGTCTTTACTAAGCAGGCCGATGGAATGTTGCTGCTTGGTACTGATCTGCCGTTTGACGTCAGCAAACCTG
AGCAGAAAAACCTGCCGCCTATGGTGATGGCATGTGAGTTTGCACCTGAACTGGAGCTGCCAACGGTGCACATTGATAAC
CTGACATCGGCATTTGAAGCCGTGAACTATCTTACGCAGATGGGTCACAAGCGCATTGCTCAGATTTCGGGCCCTAGTTC
TGCGGTACTATGCCAGTTCCGCTACCAAGGTTACCAGCAAGCGTTACGCCGAGCCGGCATTAGTATGAATCCGAATTACT
GTATCTACGGTGACTTCTCGTTTGAAGATGGTGCGAAAGCCGTCAGACAATTGTTGGCTTTACCTGAGCCGCCAACCGCG
ATTTTCTGTCACAACGATGCGATGGCCATCGGGGCAATTCAAGAAGCGAAGAAGCTGGGCTTGCGCGTCCCGCAAGACCT
GTCTGTCGTTGGCTTTGATGATATTCAGTTTGCTCAGTACTGCGATCCACCACTGACGACCATTTCTCAGCCACGTTACG
AGATTGGCCGACAGGCAATGTTGATGATGCTTGAGTTGTTGCGCGGCCATGATGTTCGTGCCGGTTCTCGATTGCTGGAA
ACTCAGCTGGTTGTCAGGGAAAGCGCTGCTCCACCGCGAGTCATCTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A097QNP8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	92.771	99.104	0.919
cytR	Vibrio parahaemolyticus RIMD 2210633	90.09	99.403	0.896