Detailed information NTG0393508

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FIV04_RS13775
• Genome accession: NZ_CP045338
• Coordinates: 3042572..3043576 (+)
• Length: 334 a.a.
• NCBI ID: WP_032549977.1
• Uniprot ID: A0A066UZA2
• Organism: Vibrio sp. THAF190c
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3037572..3048576

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FIV04_RS13755 (FIV04_13810)	metJ	3037598..3037918 (+)	321	WP_004415993.1	met regulon transcriptional regulator MetJ	-
FIV04_RS13760 (FIV04_13815)	-	3038099..3039385 (-)	1287	WP_150869392.1	malic enzyme-like NAD(P)-binding protein	-
FIV04_RS13765 (FIV04_13820)	rpmE	3039594..3039812 (-)	219	WP_032549979.1	50S ribosomal protein L31	-
FIV04_RS13770 (FIV04_13825)	priA	3040136..3042337 (+)	2202	WP_152469394.1	primosomal protein N'	-
FIV04_RS13775 (FIV04_13830)	cytR	3042572..3043576 (+)	1005	WP_032549977.1	DNA-binding transcriptional regulator CytR	Regulator
FIV04_RS13780 (FIV04_13835)	-	3043698..3044231 (+)	534	WP_032550059.1	SPOR domain-containing protein	-
FIV04_RS13785 (FIV04_13840)	hslV	3044407..3044955 (+)	549	WP_150893224.1	ATP-dependent protease subunit HslV	-
FIV04_RS13790 (FIV04_13845)	hslU	3045007..3046341 (+)	1335	WP_032549974.1	HslU--HslV peptidase ATPase subunit	-
FIV04_RS13795 (FIV04_13850)	-	3046501..3047418 (+)	918	WP_152469395.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FIV04_RS13800 (FIV04_13855)	rraA	3047492..3048010 (+)	519	WP_032549971.1	ribonuclease E activity regulator RraA	-
FIV04_RS13805 (FIV04_13860)	zapB	3048078..3048320 (-)	243	WP_032549970.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36554.04 Da
• Isoelectric Point: 6.3471

>NTDB_id=393508 FIV04_RS13775 WP_032549977.1 3042572..3043576(+) (cytR) [Vibrio sp. THAF190c]
MATMKDVAQLAGVSTATVSRALMNPEKVSVTTRKRVETAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKAEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPTSATLCQFRQQGYQQALRRAGVTMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPHDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDMLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=393508 FIV04_RS13775 WP_032549977.1 3042572..3043576(+) (cytR) [Vibrio sp. THAF190c]
ATGGCGACAATGAAGGATGTTGCCCAGTTGGCAGGTGTCTCAACAGCGACGGTATCACGAGCGCTAATGAACCCTGAAAA
AGTATCGGTGACCACTCGAAAGCGAGTTGAAACAGCGGTACTCGAAGCTGGATACTCACCCAACACTTTAGCTAGAAACT
TACGTCGCAACGAATCTAAAACCATCATCACCATCGTTCCTGATATCTGTGATCCCTACTTCGCTGAAATCATTCGCGGT
ATTGAAGACGCTGCCGTTGAAAACGACTACTTGGTTCTTCTAGGTGATAGCGGACAACAGAAAAAACGTGAGAGCTCGTT
TGTAAACTTGGTCTTCACCAAGCAAGCAGACGGCATGCTACTACTCGGAACTGACCACCCATTCGATGTCAGCAAAGCAG
AGCAGAAAAACCTGCCACCAATGGTTATGGCGTGTGAATTCGCTCCAGAGCTTGAGCTGCCAACGGTACACATCGACAAC
CTGACCTCGGCATTTGAAGCGGTGAACTACCTTGCTCAGCTGGGTCATAAGCGCATTGCTCAGATCTCAGGCCCGACATC
GGCTACCCTCTGTCAATTCCGTCAACAAGGCTATCAGCAAGCACTGCGCCGCGCAGGAGTTACCATGAACCCAGCCTACA
GCACGGTCGGTGACTTTACCTTTGAAGCGGGTGCTCAAGCGGTTCGCCAACTACTTGCACTGCCAGAGCAACCAACTGCT
ATCTTCTGTCACAATGACGCGATGGCAATTGGTGCGATTCAAGAAGCGAAGAAACTAGGTCTACGCGTCCCGCACGATCT
ATCTATTGTCGGCTTCGATGATATTCAATTCGCACAATACTGCGATCCACCGTTGACGACGATTTCTCAGCCTCGCTACG
AGATTGGACGTCAGGCGATGCTGATGATGCTTGATATGCTCAAAGGCAATGATGTTCAAGCTGGTTCTCGTCTGCTTGAA
GCGAAACTGGTCGTTCGTGGAAGTACGGCGCCACCACGCATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

3D structure

• AlphaFold DB: A0A066UZA2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.157	99.401	0.886
cytR	Vibrio parahaemolyticus RIMD 2210633	86.486	99.701	0.862