Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   GC132_RS07945 Genome accession   NZ_CP045312
Coordinates   1678260..1678886 (+) Length   208 a.a.
NCBI ID   WP_023299743.1    Uniprot ID   A0A9X7L0J6
Organism   Enterobacter hormaechei strain 14102KSN     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1673260..1683886
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GC132_RS07925 - 1673659..1675419 (-) 1761 WP_023305819.1 AAA family ATPase -
  GC132_RS07930 matP 1675606..1676058 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  GC132_RS07935 ompA 1676124..1677176 (-) 1053 WP_017694761.1 porin OmpA -
  GC132_RS07940 sulA 1677533..1678042 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  GC132_RS07945 sxy/tfoX 1678260..1678886 (+) 627 WP_023299743.1 TfoX/Sxy family DNA transformation protein Regulator
  GC132_RS07950 yccS 1678843..1681005 (-) 2163 WP_022647659.1 YccS family putative transporter -
  GC132_RS07955 - 1681024..1681470 (-) 447 WP_023299745.1 YccF domain-containing protein -
  GC132_RS07960 helD 1681593..1683647 (+) 2055 WP_038415790.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.54 Da        Isoelectric Point: 9.4592

>NTDB_id=393410 GC132_RS07945 WP_023299743.1 1678260..1678886(+) (sxy/tfoX) [Enterobacter hormaechei strain 14102KSN]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=393410 GC132_RS07945 WP_023299743.1 1678260..1678886(+) (sxy/tfoX) [Enterobacter hormaechei strain 14102KSN]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCGTCCTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment