Detailed information
Bioinformatically predicted
Overview
| Name | rocC | Type | Regulator |
| Locus tag | GCS73_RS16825 | Genome accession | NZ_CP045308 |
| Coordinates | 3757094..3757783 (-) | Length | 229 a.a. |
| NCBI ID | WP_003634235.1 | Uniprot ID | D3HMN1 |
| Organism | Legionella longbeachae strain B41211CHC | ||
| Function | rocR chaperone; repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3752094..3762783
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GCS73_RS16805 (GCS73_16685) | pyk | 3752844..3754262 (+) | 1419 | WP_003634240.1 | pyruvate kinase | - |
| GCS73_RS16815 (GCS73_16695) | - | 3754995..3755663 (+) | 669 | WP_003634238.1 | hypothetical protein | - |
| GCS73_RS16820 (GCS73_16700) | - | 3755784..3756902 (+) | 1119 | WP_003634237.1 | hypothetical protein | - |
| GCS73_RS16825 (GCS73_16705) | rocC | 3757094..3757783 (-) | 690 | WP_003634235.1 | ProQ/FinO family protein | Regulator |
| GCS73_RS16830 (GCS73_16710) | - | 3758075..3758290 (+) | 216 | WP_003634232.1 | hypothetical protein | - |
| GCS73_RS16835 (GCS73_16715) | dapB | 3758309..3759040 (+) | 732 | WP_003634231.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| GCS73_RS16840 (GCS73_16720) | - | 3759079..3761556 (-) | 2478 | WP_003634229.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 229 a.a. Molecular weight: 25675.36 Da Isoelectric Point: 10.4497
>NTDB_id=393365 GCS73_RS16825 WP_003634235.1 3757094..3757783(-) (rocC) [Legionella longbeachae strain B41211CHC]
MRKQELHPRTAVINKAQKNKSKKARTDALLWLAANFPAAFDNSLRIRPLKIGIMDDILLHAEKAAEVGISKSKLREAVVL
FTRRLDYLACLKLREMRIDLQGNDVGEVSSEEAEYAAAKIKKRVEKSARNARKALADKTANPSNPNPQGMSYHSKIMNQS
SNTTDDNFPVYPTRSTYNALNATTQPVRTTAVVVKHKSAKQYDPDAVARLKEKLGLSRNSEEKKETVEE
MRKQELHPRTAVINKAQKNKSKKARTDALLWLAANFPAAFDNSLRIRPLKIGIMDDILLHAEKAAEVGISKSKLREAVVL
FTRRLDYLACLKLREMRIDLQGNDVGEVSSEEAEYAAAKIKKRVEKSARNARKALADKTANPSNPNPQGMSYHSKIMNQS
SNTTDDNFPVYPTRSTYNALNATTQPVRTTAVVVKHKSAKQYDPDAVARLKEKLGLSRNSEEKKETVEE
Nucleotide
Download Length: 690 bp
>NTDB_id=393365 GCS73_RS16825 WP_003634235.1 3757094..3757783(-) (rocC) [Legionella longbeachae strain B41211CHC]
ATGAGAAAACAGGAGCTGCACCCACGCACCGCTGTTATTAATAAAGCTCAAAAAAATAAGTCTAAAAAAGCACGGACAGA
TGCTTTATTATGGCTTGCTGCAAATTTTCCTGCAGCATTTGATAATTCACTACGAATTCGCCCATTAAAAATTGGTATTA
TGGATGATATTTTACTTCATGCAGAAAAAGCTGCGGAAGTTGGTATTTCCAAAAGCAAATTGAGAGAAGCAGTGGTGTTA
TTTACGCGCCGTCTAGATTATTTGGCCTGTCTTAAGCTTCGAGAAATGCGAATTGATTTGCAAGGTAATGACGTTGGTGA
AGTGAGTTCAGAGGAAGCTGAATATGCGGCTGCCAAGATTAAAAAGCGTGTTGAGAAAAGTGCTCGTAACGCGCGTAAAG
CGCTTGCAGACAAAACAGCTAATCCTTCTAATCCAAATCCTCAAGGCATGAGCTACCACTCAAAAATAATGAATCAATCA
TCAAACACAACGGATGATAATTTTCCTGTTTATCCCACACGATCTACCTATAATGCCCTAAATGCAACGACACAACCGGT
TAGAACTACTGCTGTAGTGGTAAAGCATAAGTCAGCAAAACAATATGATCCTGATGCTGTAGCTCGTTTGAAAGAGAAAT
TGGGATTGTCCCGAAATTCCGAAGAAAAAAAAGAAACTGTTGAAGAGTAA
ATGAGAAAACAGGAGCTGCACCCACGCACCGCTGTTATTAATAAAGCTCAAAAAAATAAGTCTAAAAAAGCACGGACAGA
TGCTTTATTATGGCTTGCTGCAAATTTTCCTGCAGCATTTGATAATTCACTACGAATTCGCCCATTAAAAATTGGTATTA
TGGATGATATTTTACTTCATGCAGAAAAAGCTGCGGAAGTTGGTATTTCCAAAAGCAAATTGAGAGAAGCAGTGGTGTTA
TTTACGCGCCGTCTAGATTATTTGGCCTGTCTTAAGCTTCGAGAAATGCGAATTGATTTGCAAGGTAATGACGTTGGTGA
AGTGAGTTCAGAGGAAGCTGAATATGCGGCTGCCAAGATTAAAAAGCGTGTTGAGAAAAGTGCTCGTAACGCGCGTAAAG
CGCTTGCAGACAAAACAGCTAATCCTTCTAATCCAAATCCTCAAGGCATGAGCTACCACTCAAAAATAATGAATCAATCA
TCAAACACAACGGATGATAATTTTCCTGTTTATCCCACACGATCTACCTATAATGCCCTAAATGCAACGACACAACCGGT
TAGAACTACTGCTGTAGTGGTAAAGCATAAGTCAGCAAAACAATATGATCCTGATGCTGTAGCTCGTTTGAAAGAGAAAT
TGGGATTGTCCCGAAATTCCGAAGAAAAAAAAGAAACTGTTGAAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rocC | Legionella pneumophila str. Paris |
70 |
100 |
0.703 |