Detailed information NTG0393360

Bioinformatically predicted

Overview

• Name: fimT
• Type: Machinery gene
• Locus tag: GCS73_RS13330
• Genome accession: NZ_CP045308
• Coordinates: 2959367..2959900 (+)
• Length: 177 a.a.
• NCBI ID: WP_003635615.1
• Uniprot ID: D3HKN3
• Organism: Legionella longbeachae strain B41211CHC
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2954367..2964900

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GCS73_RS13315 (GCS73_13215)	-	2954915..2956414 (-)	1500	WP_003635625.1	ArnT family glycosyltransferase	-
GCS73_RS13320 (GCS73_13220)	-	2956754..2958124 (+)	1371	WP_003635620.1	hypothetical protein	-
GCS73_RS13325 (GCS73_13225)	-	2958416..2959267 (+)	852	WP_223800149.1	polysaccharide deacetylase family protein	-
GCS73_RS13330 (GCS73_13230)	fimT	2959367..2959900 (+)	534	WP_003635615.1	GspH/FimT family pseudopilin	Machinery gene
GCS73_RS13335 (GCS73_13235)	pilV	2959913..2960458 (+)	546	WP_003635614.1	type IV pilus modification protein PilV	-
GCS73_RS13340 (GCS73_13240)	-	2960455..2961522 (+)	1068	WP_012979329.1	PilW family protein	-
GCS73_RS13345 (GCS73_13245)	-	2961519..2962088 (+)	570	WP_012979330.1	pilus assembly PilX family protein	-

Sequence

Protein

• Length: 177 a.a.
• Molecular weight: 18726.72 Da
• Isoelectric Point: 6.8740

>NTDB_id=393360 GCS73_RS13330 WP_003635615.1 2959367..2959900(+) (fimT) [Legionella longbeachae strain B41211CHC]
MKVIIINKQGFTLIELLITILVFCILLVLAIPALSSLLMNNRLIAKTDMFVNSLNYARNTALGESINVVVCPFGVAQSTT
CGGSWSNGWIVITQPSVGTSTLLQSQQLFSVDPVLSGNVPSVVFDPHGLTTTSGNFKFCDSRGGAFARSIEVLATGFVQS
GATPGQAVWDNSALTCP

Nucleotide

• Length: 534 bp

>NTDB_id=393360 GCS73_RS13330 WP_003635615.1 2959367..2959900(+) (fimT) [Legionella longbeachae strain B41211CHC]
TTGAAAGTCATAATAATAAACAAGCAGGGATTCACATTAATTGAGCTCTTAATCACTATATTAGTTTTTTGTATTTTATT
AGTTTTAGCAATACCGGCATTGAGTAGCCTGCTGATGAATAATCGCCTGATTGCCAAAACAGACATGTTCGTAAATTCGC
TTAATTATGCGCGCAATACCGCTTTAGGCGAGTCAATCAACGTTGTAGTTTGTCCATTTGGCGTAGCTCAATCGACAACA
TGCGGCGGTAGTTGGAGCAATGGATGGATTGTGATCACACAACCTTCTGTAGGTACGAGCACCTTATTACAAAGCCAACA
ACTTTTTTCTGTTGATCCTGTACTTTCAGGCAATGTACCCAGCGTAGTATTTGACCCACACGGATTGACAACGACATCAG
GTAACTTTAAGTTTTGCGACAGTAGAGGAGGGGCATTTGCTCGCTCCATAGAAGTATTGGCAACTGGATTCGTACAATCA
GGCGCAACCCCCGGACAGGCAGTTTGGGATAACAGCGCGCTTACATGTCCTTGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (7-30)

• Type II transport protein GspH (GspH) (49-156)

3D structure

• AlphaFold DB: D3HKN3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
fimT	Legionella pneumophila strain Lp02	60.714	94.915	0.576