Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | GCS73_RS02290 | Genome accession | NZ_CP045308 |
| Coordinates | 416470..417522 (+) | Length | 350 a.a. |
| NCBI ID | WP_003633239.1 | Uniprot ID | D3HP88 |
| Organism | Legionella longbeachae strain B41211CHC | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 411470..422522
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GCS73_RS18350 (GCS73_02230) | - | 411677..412602 (-) | 926 | Protein_371 | type IV secretion system DotC family protein | - |
| GCS73_RS02270 (GCS73_02235) | dotD | 412583..413074 (-) | 492 | WP_003633244.1 | type IVB secretion system lipoprotein DotD | - |
| GCS73_RS02275 (GCS73_02240) | rsmD | 413243..413788 (-) | 546 | WP_003633243.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| GCS73_RS02280 (GCS73_02245) | - | 413785..415089 (-) | 1305 | WP_003633242.1 | M16 family metallopeptidase | - |
| GCS73_RS02285 (GCS73_02250) | - | 415086..416381 (-) | 1296 | WP_396426634.1 | M16 family metallopeptidase | - |
| GCS73_RS02290 (GCS73_02255) | pilA | 416470..417522 (+) | 1053 | WP_003633239.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| GCS73_RS02295 (GCS73_02260) | ftsE | 417509..418159 (+) | 651 | WP_003633237.1 | cell division ATP-binding protein FtsE | - |
| GCS73_RS02300 (GCS73_02265) | ftsX | 418153..419082 (+) | 930 | WP_003633236.1 | permease-like cell division protein FtsX | - |
| GCS73_RS02305 (GCS73_02270) | rpoH | 419129..419983 (+) | 855 | WP_003633234.1 | RNA polymerase sigma factor RpoH | - |
| GCS73_RS02310 (GCS73_02275) | - | 420122..421000 (-) | 879 | WP_003633233.1 | alpha/beta hydrolase | - |
| GCS73_RS02315 (GCS73_02280) | - | 421254..421970 (+) | 717 | WP_003633231.1 | dienelactone hydrolase family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 38240.87 Da Isoelectric Point: 6.5102
>NTDB_id=393333 GCS73_RS02290 WP_003633239.1 416470..417522(+) (pilA) [Legionella longbeachae strain B41211CHC]
MIKWFKRSHTPTSSEADESQHKEELMPQAPMTKAEQEQEPVKEGFFARFRKSLSKTRHQLGDGIGRLLLGKKEISQELLD
ELETLLISADLGIETTQAVLNQLTEGLARKQLSDGNAVYEALKSYLQGILKQKNQSLTLETADHSPFVILMVGVNGAGKT
TTIGKLAKQFQQQGKKVMLAAGDTFRAAAVEQLLVWGERNDIPVIAQHTGADSASVIFDALQAAKARKMDVLIADTAGRL
HTQSNLMEELKKVKRVLQKLSPDAPHETMLILDASIGQNALVQARQFNEAIGLTGVTMTKLDGTAKGGILFAIANELGIP
FRYIGIGEGIEDLQPFDAAQFVGALFNDHI
MIKWFKRSHTPTSSEADESQHKEELMPQAPMTKAEQEQEPVKEGFFARFRKSLSKTRHQLGDGIGRLLLGKKEISQELLD
ELETLLISADLGIETTQAVLNQLTEGLARKQLSDGNAVYEALKSYLQGILKQKNQSLTLETADHSPFVILMVGVNGAGKT
TTIGKLAKQFQQQGKKVMLAAGDTFRAAAVEQLLVWGERNDIPVIAQHTGADSASVIFDALQAAKARKMDVLIADTAGRL
HTQSNLMEELKKVKRVLQKLSPDAPHETMLILDASIGQNALVQARQFNEAIGLTGVTMTKLDGTAKGGILFAIANELGIP
FRYIGIGEGIEDLQPFDAAQFVGALFNDHI
Nucleotide
Download Length: 1053 bp
>NTDB_id=393333 GCS73_RS02290 WP_003633239.1 416470..417522(+) (pilA) [Legionella longbeachae strain B41211CHC]
ATGATTAAATGGTTCAAACGCAGTCACACGCCAACTTCTTCAGAAGCAGATGAGTCCCAGCATAAAGAAGAGTTAATGCC
GCAAGCTCCTATGACGAAGGCGGAACAAGAGCAAGAGCCTGTAAAAGAAGGATTTTTTGCGCGTTTTAGGAAAAGTTTAA
GTAAAACGCGTCATCAGTTAGGTGATGGTATTGGCCGGTTATTGTTAGGGAAAAAAGAAATCAGTCAAGAGTTGCTGGAT
GAGTTAGAAACTCTTTTAATCAGTGCTGATTTAGGGATAGAAACCACACAAGCGGTATTAAATCAATTGACAGAAGGTTT
AGCACGTAAGCAATTGTCTGACGGTAATGCTGTTTATGAGGCACTTAAATCGTATTTACAAGGGATTTTAAAGCAAAAAA
ATCAATCGTTGACTTTAGAAACCGCAGATCATTCCCCTTTTGTCATTTTAATGGTTGGCGTGAATGGAGCTGGTAAAACA
ACCACTATTGGTAAATTAGCAAAGCAATTTCAACAGCAGGGTAAAAAAGTGATGTTAGCTGCTGGAGATACTTTTAGAGC
TGCAGCGGTAGAACAGTTGCTTGTTTGGGGGGAGCGAAATGATATTCCCGTTATTGCCCAACATACAGGAGCTGATAGTG
CATCCGTTATTTTTGATGCTCTTCAGGCAGCTAAAGCACGAAAAATGGATGTATTAATTGCGGATACGGCGGGACGCTTA
CATACCCAAAGCAATTTAATGGAAGAATTGAAAAAAGTAAAAAGGGTATTACAAAAACTATCTCCTGATGCGCCTCATGA
AACAATGTTGATATTGGATGCATCTATAGGGCAAAATGCATTAGTTCAAGCAAGGCAATTCAATGAAGCGATTGGATTAA
CGGGTGTTACCATGACTAAACTGGATGGGACAGCTAAAGGCGGTATTTTGTTTGCTATTGCTAATGAACTAGGGATACCC
TTTCGTTATATAGGGATTGGTGAGGGAATAGAGGATCTTCAACCCTTTGATGCTGCGCAATTTGTTGGTGCATTATTTAA
TGATCACATTTGA
ATGATTAAATGGTTCAAACGCAGTCACACGCCAACTTCTTCAGAAGCAGATGAGTCCCAGCATAAAGAAGAGTTAATGCC
GCAAGCTCCTATGACGAAGGCGGAACAAGAGCAAGAGCCTGTAAAAGAAGGATTTTTTGCGCGTTTTAGGAAAAGTTTAA
GTAAAACGCGTCATCAGTTAGGTGATGGTATTGGCCGGTTATTGTTAGGGAAAAAAGAAATCAGTCAAGAGTTGCTGGAT
GAGTTAGAAACTCTTTTAATCAGTGCTGATTTAGGGATAGAAACCACACAAGCGGTATTAAATCAATTGACAGAAGGTTT
AGCACGTAAGCAATTGTCTGACGGTAATGCTGTTTATGAGGCACTTAAATCGTATTTACAAGGGATTTTAAAGCAAAAAA
ATCAATCGTTGACTTTAGAAACCGCAGATCATTCCCCTTTTGTCATTTTAATGGTTGGCGTGAATGGAGCTGGTAAAACA
ACCACTATTGGTAAATTAGCAAAGCAATTTCAACAGCAGGGTAAAAAAGTGATGTTAGCTGCTGGAGATACTTTTAGAGC
TGCAGCGGTAGAACAGTTGCTTGTTTGGGGGGAGCGAAATGATATTCCCGTTATTGCCCAACATACAGGAGCTGATAGTG
CATCCGTTATTTTTGATGCTCTTCAGGCAGCTAAAGCACGAAAAATGGATGTATTAATTGCGGATACGGCGGGACGCTTA
CATACCCAAAGCAATTTAATGGAAGAATTGAAAAAAGTAAAAAGGGTATTACAAAAACTATCTCCTGATGCGCCTCATGA
AACAATGTTGATATTGGATGCATCTATAGGGCAAAATGCATTAGTTCAAGCAAGGCAATTCAATGAAGCGATTGGATTAA
CGGGTGTTACCATGACTAAACTGGATGGGACAGCTAAAGGCGGTATTTTGTTTGCTATTGCTAATGAACTAGGGATACCC
TTTCGTTATATAGGGATTGGTGAGGGAATAGAGGATCTTCAACCCTTTGATGCTGCGCAATTTGTTGGTGCATTATTTAA
TGATCACATTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
55.375 |
87.714 |
0.486 |