Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GCS91_RS25795 Genome accession   NZ_CP045291
Coordinates   5593833..5594231 (-) Length   132 a.a.
NCBI ID   WP_016447937.1    Uniprot ID   A0AAX3SQK3
Organism   Delftia tsuruhatensis strain TR1180     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5588833..5599231
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GCS91_RS25780 (GCS91_25780) - 5590654..5592906 (-) 2253 WP_016447934.1 methyl-accepting chemotaxis protein -
  GCS91_RS25785 (GCS91_25785) - 5592925..5593452 (-) 528 WP_016447935.1 chemotaxis protein CheW -
  GCS91_RS25790 (GCS91_25790) - 5593468..5593833 (-) 366 WP_016447936.1 response regulator -
  GCS91_RS25795 (GCS91_25795) pilG 5593833..5594231 (-) 399 WP_016447937.1 response regulator Regulator
  GCS91_RS25800 (GCS91_25800) - 5594279..5594431 (-) 153 WP_017406135.1 rubredoxin -
  GCS91_RS25805 (GCS91_25805) thiD 5594547..5595506 (+) 960 WP_016453190.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  GCS91_RS25810 (GCS91_25810) hemL 5595581..5596897 (+) 1317 WP_370690594.1 glutamate-1-semialdehyde 2,1-aminomutase -
  GCS91_RS25815 (GCS91_25815) - 5596948..5597547 (-) 600 WP_074922779.1 DNA-3-methyladenine glycosylase I -
  GCS91_RS25820 (GCS91_25820) - 5597550..5598026 (-) 477 WP_017406137.1 c-type cytochrome -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14600.85 Da        Isoelectric Point: 6.9242

>NTDB_id=393130 GCS91_RS25795 WP_016447937.1 5593833..5594231(-) (pilG) [Delftia tsuruhatensis strain TR1180]
MTTSGAPLRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
DTPVVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVEQFGKQTIGAL

Nucleotide


Download         Length: 399 bp        

>NTDB_id=393130 GCS91_RS25795 WP_016447937.1 5593833..5594231(-) (pilG) [Delftia tsuruhatensis strain TR1180]
GTGACGACATCGGGCGCACCCTTGCGCGTACTCGTGGTGGATGACAGCAATACCATCCGCCGCAGCGCAGAAATCTTCCT
CAAGCAGGGCGGGCACGAAGTGCTCCTGGCCGACGACGGCTTCGACGCACTGTCCAAGGTCAACGACTACCAGCCCCAGC
TGATCTTCTGCGACATCCTCATGCCCAAGCTGGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCGCGCTTTGCT
GACACGCCTGTGGTCATGCTCTCGTCCAAGGACGGCGTATTCGACAAGGCGCGCGGGCGCATGGTGGGCTGCCAGGACTA
CCTCACGAAACCCTTCACCAAAGACCAGCTGCTGCAGGCTGTGGAGCAGTTCGGCAAGCAAACCATAGGAGCACTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.772

86.364

0.508

Multiple sequence alignment