Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   FDZ14_RS24370 Genome accession   NZ_CP045272
Coordinates   4601467..4601661 (-) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium strain FDU301     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4596467..4606661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FDZ14_RS24345 (FDZ14_24185) - 4596633..4597655 (-) 1023 WP_016763041.1 ABC transporter ATP-binding protein -
  FDZ14_RS24350 (FDZ14_24190) - 4597882..4598655 (-) 774 WP_016763040.1 DUF2268 domain-containing protein -
  FDZ14_RS24355 (FDZ14_24195) fabF 4598762..4600003 (-) 1242 WP_171777705.1 beta-ketoacyl-ACP synthase II -
  FDZ14_RS24360 (FDZ14_24200) - 4600043..4600981 (-) 939 WP_016763039.1 beta-ketoacyl-ACP synthase III -
  FDZ14_RS24365 (FDZ14_24205) - 4601238..4601438 (+) 201 WP_016763038.1 hypothetical protein -
  FDZ14_RS24370 (FDZ14_24210) comZ 4601467..4601661 (-) 195 WP_013081746.1 ComZ family protein Regulator
  FDZ14_RS24375 (FDZ14_24215) - 4601739..4602623 (-) 885 WP_171777706.1 NAD(P)-dependent oxidoreductase -
  FDZ14_RS24380 (FDZ14_24220) - 4602805..4603545 (-) 741 WP_171777707.1 alpha/beta hydrolase -
  FDZ14_RS24385 (FDZ14_24225) - 4603755..4603943 (+) 189 WP_013055400.1 YjzD family protein -
  FDZ14_RS24390 (FDZ14_24230) - 4604146..4605030 (+) 885 WP_034654398.1 NAD(P)-dependent oxidoreductase -
  FDZ14_RS24395 (FDZ14_24235) galT 4605073..4606596 (-) 1524 WP_047931011.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=393078 FDZ14_RS24370 WP_013081746.1 4601467..4601661(-) (comZ) [Priestia megaterium strain FDU301]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=393078 FDZ14_RS24370 WP_013081746.1 4601467..4601661(-) (comZ) [Priestia megaterium strain FDU301]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAACAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTACAGCCGGTATTGACATTACTAACAAAAGTAATGAACGATGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563

Multiple sequence alignment