Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   FDZ14_RS11020 Genome accession   NZ_CP045272
Coordinates   1953259..1954209 (+) Length   316 a.a.
NCBI ID   WP_013057891.1    Uniprot ID   A0A0B6AV51
Organism   Priestia megaterium strain FDU301     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1948259..1959209
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FDZ14_RS10990 (FDZ14_10900) - 1948403..1949449 (+) 1047 WP_171776971.1 galactitol-1-phosphate 5-dehydrogenase -
  FDZ14_RS10995 (FDZ14_10905) - 1949455..1950486 (+) 1032 WP_171776972.1 zinc-binding dehydrogenase -
  FDZ14_RS11000 (FDZ14_10910) - 1950529..1950873 (+) 345 WP_047932007.1 hypothetical protein -
  FDZ14_RS11005 - 1951191..1951355 (+) 165 WP_013057894.1 hypothetical protein -
  FDZ14_RS11010 (FDZ14_10915) - 1951437..1951691 (-) 255 WP_013057893.1 hypothetical protein -
  FDZ14_RS11015 (FDZ14_10920) - 1952054..1952860 (+) 807 WP_016764833.1 cell wall hydrolase -
  FDZ14_RS11020 (FDZ14_10925) ceuB 1953259..1954209 (+) 951 WP_013057891.1 ABC transporter permease Machinery gene
  FDZ14_RS11025 (FDZ14_10930) - 1954202..1955149 (+) 948 WP_016764832.1 iron chelate uptake ABC transporter family permease subunit -
  FDZ14_RS11030 (FDZ14_10935) - 1955143..1955901 (+) 759 WP_013057889.1 ABC transporter ATP-binding protein -
  FDZ14_RS11035 (FDZ14_10940) - 1955925..1956881 (+) 957 WP_047932008.1 siderophore ABC transporter substrate-binding protein -
  FDZ14_RS11040 (FDZ14_10945) - 1957312..1958154 (+) 843 WP_034650592.1 manganese catalase family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35037.32 Da        Isoelectric Point: 9.9188

>NTDB_id=393062 FDZ14_RS11020 WP_013057891.1 1953259..1954209(+) (ceuB) [Priestia megaterium strain FDU301]
MKFYQLILVFAVLSILSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=393062 FDZ14_RS11020 WP_013057891.1 1953259..1954209(+) (ceuB) [Priestia megaterium strain FDU301]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTATCGATTTTGTCTCTTTTTGTAGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGCATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACGGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTGGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCGCTAGTCGGTTTAATGCTCGGCAGTATCGTAAGTTCCTTAGCTACCTTCATCGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTGAGTATACC
TCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATTGTAAACATTGGATTAGTCATTGTGTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATTCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCGCTGCTTGGAGCTGTGTTCGTACTGGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAATCTCTATTG
GGCTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B6AV51

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.318

95.57

0.5

Multiple sequence alignment