Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   HA036_RS03960 Genome accession   NZ_CP053639
Coordinates   757343..758143 (+) Length   266 a.a.
NCBI ID   WP_000088648.1    Uniprot ID   A0A0H2XG71
Organism   Staphylococcus aureus strain 14732     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 752343..763143
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HA036_RS03945 (HA036_03955) walK 753011..754837 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  HA036_RS03950 (HA036_03960) yycH 754830..756164 (+) 1335 WP_001060131.1 two-component system activity regulator YycH -
  HA036_RS03955 (HA036_03965) - 756165..756953 (+) 789 WP_001104172.1 two-component system regulatory protein YycI -
  HA036_RS03960 (HA036_03970) vicX 757343..758143 (+) 801 WP_000088648.1 MBL fold metallo-hydrolase Regulator
  HA036_RS03965 (HA036_03975) adsA 758371..760693 (+) 2323 Protein_742 LPXTG-anchored adenosine synthase AdsA -
  HA036_RS03970 (HA036_03980) rlmH 761061..761540 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  HA036_RS03975 (HA036_03985) - 761629..762258 (+) 630 WP_001053439.1 hypothetical protein -
  HA036_RS03980 (HA036_03990) - 762273..762515 (+) 243 WP_000931963.1 hypothetical protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30327.55 Da        Isoelectric Point: 6.3392

>NTDB_id=393023 HA036_RS03960 WP_000088648.1 757343..758143(+) (vicX) [Staphylococcus aureus strain 14732]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=393023 HA036_RS03960 WP_000088648.1 757343..758143(+) (vicX) [Staphylococcus aureus strain 14732]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGAAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGCTCATGCAATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XG71

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.416

96.617

0.477