Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   HA037_RS13310 Genome accession   NZ_CP053636
Coordinates   2692617..2693087 (-) Length   156 a.a.
NCBI ID   WP_173863713.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 14640     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2687617..2698087
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HA037_RS13280 (HA037_13295) - 2687658..2688071 (+) 414 WP_001123303.1 DUF393 domain-containing protein -
  HA037_RS13285 (HA037_13300) - 2688271..2688714 (+) 444 WP_000070866.1 Dps family protein -
  HA037_RS13290 (HA037_13305) deoD 2688835..2689545 (-) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  HA037_RS13295 (HA037_13310) deoC 2689859..2690521 (+) 663 WP_001083318.1 deoxyribose-phosphate aldolase -
  HA037_RS13300 (HA037_13315) - 2690800..2692101 (+) 1302 WP_001242311.1 pyrimidine-nucleoside phosphorylase -
  HA037_RS13305 (HA037_13320) - 2692115..2692465 (+) 351 WP_001024035.1 membrane protein -
  HA037_RS13310 (HA037_13325) luxS 2692617..2693087 (-) 471 WP_173863713.1 S-ribosylhomocysteine lyase Regulator
  HA037_RS13315 (HA037_13330) - 2693398..2694582 (+) 1185 WP_001291497.1 M20 family metallopeptidase -
  HA037_RS13320 (HA037_13335) - 2694582..2695775 (+) 1194 WP_000183717.1 hypothetical protein -
  HA037_RS13325 (HA037_13340) - 2696174..2696845 (+) 672 WP_000120549.1 DUF2750 domain-containing protein -
  HA037_RS13330 (HA037_13345) coaW 2696977..2697780 (-) 804 WP_000862728.1 type II pantothenate kinase -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17540.78 Da        Isoelectric Point: 5.4567

>NTDB_id=393002 HA037_RS13310 WP_173863713.1 2692617..2693087(-) (luxS) [Staphylococcus aureus strain 14640]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLNPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=393002 HA037_RS13310 WP_173863713.1 2692617..2693087(-) (luxS) [Staphylococcus aureus strain 14640]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCAG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAATCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

43.972

90.385

0.397