Detailed information NTG0392791

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: FD951_RS05645
• Genome accession: NZ_CP045221
• Coordinates: 1215286..1217517 (+)
• Length: 743 a.a.
• NCBI ID: WP_023968415.1
• Uniprot ID: -
• Organism: Pseudomonas chlororaphis subsp. aurantiaca strain ARS 38
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1210286..1222517

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FD951_RS05620 (FD951_05620)	-	1211407..1212066 (+)	660	WP_023968410.1	transglutaminase family protein	-
FD951_RS05625 (FD951_05625)	-	1212109..1212732 (+)	624	WP_023968411.1	glutathione S-transferase family protein	-
FD951_RS05630 (FD951_05630)	-	1212865..1213797 (+)	933	WP_023968412.1	ABC transporter ATP-binding protein	-
FD951_RS05635 (FD951_05635)	-	1213794..1214573 (+)	780	WP_023968413.1	ABC transporter permease	-
FD951_RS05640 (FD951_05640)	-	1214622..1215137 (-)	516	WP_023968414.1	DUF2062 domain-containing protein	-
FD951_RS05645 (FD951_05645)	comA	1215286..1217517 (+)	2232	WP_023968415.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
FD951_RS05650 (FD951_05650)	exbB	1217620..1218255 (+)	636	WP_023968416.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
FD951_RS05655 (FD951_05655)	-	1218252..1218680 (+)	429	WP_023968417.1	biopolymer transporter ExbD	-
FD951_RS05660 (FD951_05660)	lpxK	1218680..1219690 (+)	1011	WP_023968418.1	tetraacyldisaccharide 4'-kinase	-
FD951_RS05665 (FD951_05665)	-	1219714..1219899 (+)	186	WP_007931663.1	Trm112 family protein	-
FD951_RS05670 (FD951_05670)	kdsB	1219896..1220660 (+)	765	WP_023968419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
FD951_RS05675 (FD951_05675)	-	1220660..1221124 (+)	465	WP_007931667.1	low molecular weight protein-tyrosine-phosphatase	-
FD951_RS05680 (FD951_05680)	murB	1221121..1222140 (+)	1020	WP_023968420.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 743 a.a.
• Molecular weight: 81233.30 Da
• Isoelectric Point: 9.7319

>NTDB_id=392791 FD951_RS05645 WP_023968415.1 1215286..1217517(+) (comA) [Pseudomonas chlororaphis subsp. aurantiaca strain ARS 38]
MRTGMLALAAGLLSLRFLPALPAIGWLAVLPAVALMLLPFRTYPLAFFLLGLAWACVSAQWALDDRLAEPLDGQTRWLEG
QVVGLPQQAEGVLRFELEGGRARRGRIPQRLRLAWYGGPPVHSGERWRLAVKLKRPAGLVNLQAFDHEAWLLAQRIGATG
TVKDGQRLAATQESWRARIRQRLLQVDAQGRVGGLAALVLGDGSGLSREDWRVLQDTGTVHLMVISGQHISLLAAVMYAL
VAGLARYGLWPGRWPWLPWACGLAFASALGYGLLAGFDVPVRRACVMVALVLIWRLRFRHLGAWWPFLLALNAVLLFEPL
ASLQPGFWLSFTAVAVLILIFGGRLGGWRWWQSWTRIQWLIAIGLCPVLLALGLPISLSGPLANLLAEPWISLLVLPPAL
LGTLFLAVPYLGEGLLWLAGGLLDVLFRGLALLAAQWPAWIAPAIPLWAWSICALGAFLLLLPAGVPLRPLGWPMLLLMV
FPPKDTLPYGEAEVWQLDVGQGLAVLVRTREHAMLYDAGPRFGDSDLGARVVLPSLRKLGVGRLDLMLLSHADADHAGGA
DAIQRGLPVARLVSGDPEGLPAYLPAEPCASGEQWQWDGVRFALWQWADAQNGNQKSCVMQVEAKGERLLLTGDIDALAE
RALLDTPLAVETHWLQAPHHGSRSSSSPALLKALAPSAVLISRGHGNGFGHPHPQVVERYRQQGIAIYDSAEHGALQLML
GSYTEPTSLRAQRRFWRKWPLSP

Nucleotide

• Length: 2232 bp

>NTDB_id=392791 FD951_RS05645 WP_023968415.1 1215286..1217517(+) (comA) [Pseudomonas chlororaphis subsp. aurantiaca strain ARS 38]
ATGCGCACAGGGATGCTGGCGTTGGCGGCGGGGCTTTTGAGCCTGCGCTTTTTGCCGGCGCTGCCAGCGATCGGATGGCT
GGCAGTGCTGCCGGCAGTGGCCTTGATGCTGCTGCCGTTTCGTACCTATCCATTGGCTTTTTTCCTGTTGGGCCTGGCGT
GGGCTTGCGTGAGCGCGCAATGGGCGCTGGACGATCGTTTGGCGGAACCGCTTGATGGGCAGACCCGCTGGCTCGAGGGC
CAGGTGGTGGGACTGCCGCAGCAGGCCGAGGGTGTGTTGCGTTTCGAACTGGAAGGCGGGCGGGCACGGCGCGGACGGAT
TCCCCAGCGCCTGCGCCTGGCCTGGTATGGCGGGCCGCCGGTGCACAGCGGCGAACGCTGGCGCCTGGCGGTAAAACTCA
AGCGCCCCGCCGGGCTGGTCAATCTGCAGGCCTTCGATCACGAGGCCTGGCTGCTGGCCCAGCGCATCGGCGCCACGGGC
ACGGTCAAGGATGGGCAACGGCTGGCCGCCACGCAGGAGAGCTGGCGTGCGCGCATTCGCCAACGCTTGCTGCAAGTCGA
TGCCCAGGGGCGCGTCGGTGGCCTGGCGGCCTTGGTGCTGGGTGACGGCTCGGGGCTGAGTCGGGAGGATTGGCGTGTCC
TGCAAGACACCGGGACCGTGCACCTGATGGTGATTTCCGGGCAGCACATCAGTTTGCTGGCCGCGGTGATGTATGCCCTG
GTGGCGGGGCTGGCCCGCTACGGCCTGTGGCCCGGACGTTGGCCCTGGCTGCCCTGGGCCTGTGGGCTGGCATTCGCTTC
GGCGCTGGGTTACGGGTTGCTGGCGGGCTTCGATGTGCCGGTGCGTCGTGCCTGCGTGATGGTTGCCCTGGTGCTGATCT
GGCGCCTGCGCTTTCGTCACCTGGGCGCCTGGTGGCCGTTTCTGCTGGCGTTGAATGCGGTGCTGTTGTTCGAGCCGCTG
GCCAGTCTGCAGCCAGGGTTCTGGCTGTCCTTTACCGCGGTGGCGGTGCTGATCCTGATCTTCGGCGGGCGCCTGGGAGG
CTGGCGCTGGTGGCAGTCCTGGACCCGCATCCAATGGTTGATCGCCATCGGCCTGTGCCCAGTGCTACTGGCGCTGGGGT
TGCCCATCAGCCTCAGCGGGCCGCTGGCCAATCTGCTGGCGGAACCCTGGATCAGCCTGTTGGTGCTGCCGCCGGCGTTG
CTCGGTACCTTGTTCCTGGCGGTGCCTTACCTGGGCGAAGGCTTGCTCTGGCTGGCCGGTGGTTTGCTGGATGTGCTGTT
TCGCGGTCTGGCGCTGCTGGCCGCACAATGGCCGGCCTGGATAGCGCCGGCCATACCGCTCTGGGCCTGGAGTATCTGCG
CGCTGGGGGCTTTTCTGCTGTTGCTGCCCGCTGGCGTGCCGCTGCGTCCCTTGGGATGGCCGATGCTGCTGTTGATGGTG
TTCCCGCCGAAAGACACCCTGCCATACGGCGAGGCGGAAGTCTGGCAGCTGGATGTTGGGCAGGGCCTGGCGGTGCTGGT
GCGGACTCGCGAGCACGCGATGCTGTATGACGCCGGCCCGCGTTTTGGCGATTCCGACCTGGGCGCCCGGGTGGTGCTGC
CATCGTTGCGCAAGCTGGGCGTCGGGCGTCTAGACCTGATGCTGCTCAGTCACGCCGATGCCGATCATGCCGGTGGCGCC
GACGCCATCCAGCGCGGCTTGCCGGTGGCCAGGCTGGTCAGCGGCGATCCCGAGGGCTTGCCGGCCTATTTGCCGGCAGA
ACCTTGTGCCAGCGGCGAGCAGTGGCAATGGGACGGGGTACGTTTTGCCCTGTGGCAATGGGCGGATGCGCAGAACGGTA
ACCAGAAGTCCTGCGTGATGCAGGTCGAGGCCAAGGGCGAGCGTTTGCTGCTGACGGGGGATATCGATGCCCTGGCGGAA
CGAGCGTTGCTGGATACCCCGCTGGCCGTCGAGACTCATTGGTTGCAGGCGCCGCACCACGGCAGCCGCAGCTCGTCGTC
CCCGGCCTTGCTCAAGGCCCTCGCGCCTTCGGCGGTGCTGATTTCCCGAGGGCACGGTAATGGCTTCGGGCATCCGCACC
CGCAGGTCGTCGAGCGTTATCGCCAGCAAGGGATCGCCATTTACGACAGTGCGGAGCACGGAGCGCTGCAACTGATGCTG
GGCTCCTACACCGAACCGACGAGCCTGCGGGCGCAGCGGCGCTTTTGGCGCAAATGGCCACTATCTCCTTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (24-167)

• Competence protein (Competence) (198-463)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-685)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	64.673	96.77	0.626