Detailed information NTG0392640

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HO395_RS14910
• Genome accession: NZ_CP053603
• Coordinates: 3086587..3087570 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain Dam/Dcm
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3081587..3092570

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HO395_RS14895 (HO395_14900)	dppA	3082730..3084337 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
HO395_RS22610	-	3084371..3084481 (-)	111	Protein_2944	hypothetical protein	-
HO395_RS14900 (HO395_14905)	dppB	3084645..3085664 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HO395_RS14905 (HO395_14910)	dppC	3085674..3086576 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HO395_RS14910 (HO395_14915)	amiE	3086587..3087570 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
HO395_RS14915 (HO395_14920)	dppF	3087567..3088571 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HO395_RS14920 (HO395_14925)	yhjV	3088601..3089872 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
HO395_RS14925 (HO395_14930)	ldrD	3090348..3090455 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
HO395_RS14930 (HO395_14935)	bcsG	3090542..3092221 (-)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
HO395_RS14935 (HO395_14940)	bcsF	3092218..3092409 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=392640 HO395_RS14910 WP_001196486.1 3086587..3087570(+) (amiE) [Escherichia coli strain Dam/Dcm]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=392640 HO395_RS14910 WP_001196486.1 3086587..3087570(+) (amiE) [Escherichia coli strain Dam/Dcm]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404