Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   GA693_RS14685 Genome accession   NZ_CP045198
Coordinates   2994080..2994958 (+) Length   292 a.a.
NCBI ID   WP_005182159.1    Uniprot ID   N9KSY6
Organism   Acinetobacter indicus strain TQ23     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2989080..2999958
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GA693_RS14655 wrbA 2989894..2990490 (+) 597 WP_104470746.1 NAD(P)H:quinone oxidoreductase -
  GA693_RS14660 - 2990788..2990970 (+) 183 WP_045796412.1 hypothetical protein -
  GA693_RS14665 - 2991028..2991408 (-) 381 WP_160241632.1 hypothetical protein -
  GA693_RS14670 - 2991625..2992200 (-) 576 WP_005182137.1 xanthine phosphoribosyltransferase -
  GA693_RS14675 - 2992290..2993003 (-) 714 WP_005182145.1 DUF3108 domain-containing protein -
  GA693_RS14680 - 2993157..2993840 (-) 684 WP_160241631.1 hypothetical protein -
  GA693_RS14685 tonB2 2994080..2994958 (+) 879 WP_005182159.1 energy transducer TonB Machinery gene
  GA693_RS14690 - 2994955..2995245 (-) 291 WP_016659563.1 antibiotic biosynthesis monooxygenase -
  GA693_RS14695 ybeY 2995336..2995818 (-) 483 WP_005182166.1 rRNA maturation RNase YbeY -
  GA693_RS14700 - 2995838..2996911 (-) 1074 WP_016659561.1 PhoH family protein -
  GA693_RS14705 miaB 2996953..2998407 (-) 1455 WP_104472822.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 292 a.a.        Molecular weight: 33024.72 Da        Isoelectric Point: 9.1867

>NTDB_id=392635 GA693_RS14685 WP_005182159.1 2994080..2994958(+) (tonB2) [Acinetobacter indicus strain TQ23]
MLKKFHFAPLTQQWWKDPLFGTVLTLAALSHLAVLTVQFVMPQQSDAAVKEIAVSLRPSATEIKDADFLAQADQQGSGTF
REAHRMSSDMPAPMIEQSAGDQQLESLERLQQQRELSFEEKVLMTTLSWQKQAAENQRKKALEELNSQFQAKAAMVASLE
AQYLQRQQNFSRQQKIKTVDGIQAKQDVAAGYLEKFRQKVEFYGNRYYPEAAKQQQLAGEVRLMVILNANGGIRAIRLIE
SSGHAMLDEAAKASVRKAAPFGAFDAKMKDISELRIIRTWRFDPAEAEFEVR

Nucleotide


Download         Length: 879 bp        

>NTDB_id=392635 GA693_RS14685 WP_005182159.1 2994080..2994958(+) (tonB2) [Acinetobacter indicus strain TQ23]
ATGTTAAAGAAATTTCATTTTGCACCTTTGACGCAGCAGTGGTGGAAAGATCCACTATTTGGCACCGTACTGACGCTGGC
GGCACTTTCGCATCTGGCTGTGTTAACGGTGCAATTTGTCATGCCACAGCAAAGCGATGCCGCGGTCAAGGAAATTGCGG
TCAGCTTAAGGCCAAGTGCCACCGAAATTAAGGACGCCGACTTTTTAGCACAGGCCGATCAGCAAGGTTCTGGCACCTTC
CGGGAAGCGCACCGCATGTCCAGCGATATGCCCGCACCAATGATTGAACAGAGTGCCGGTGATCAGCAGCTGGAAAGTCT
TGAGCGTTTGCAGCAGCAGCGTGAACTGAGCTTTGAAGAAAAAGTGCTAATGACCACCTTAAGCTGGCAAAAGCAGGCGG
CGGAAAACCAGCGTAAAAAAGCGCTGGAAGAATTAAACAGCCAGTTTCAGGCCAAAGCGGCGATGGTGGCCAGTCTGGAA
GCGCAGTATTTACAGCGTCAGCAAAATTTCAGCCGTCAGCAGAAAATTAAAACCGTAGATGGAATTCAGGCCAAGCAGGA
TGTCGCGGCCGGTTATCTGGAAAAATTCCGTCAGAAAGTCGAATTTTATGGTAATCGTTATTATCCGGAAGCGGCCAAGC
AGCAACAGCTGGCCGGTGAAGTACGTTTAATGGTGATTTTAAATGCCAACGGCGGGATTCGCGCGATTCGTTTAATTGAA
AGCTCGGGACATGCCATGCTGGATGAAGCTGCCAAGGCTTCTGTGCGTAAAGCTGCTCCTTTTGGTGCCTTTGATGCCAA
GATGAAAGATATTTCCGAGCTACGCATTATCCGGACCTGGCGTTTTGACCCGGCTGAGGCGGAGTTTGAGGTGCGCTAG

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(205-282)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9KSY6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

76.344

95.548

0.729

Multiple sequence alignment