Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   D5R78_RS01945 Genome accession   NZ_CP045187
Coordinates   424545..425441 (+) Length   298 a.a.
NCBI ID   WP_119880918.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain VB19458     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 419545..430441
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D5R78_RS01925 (D5R78_012660) - 420357..421304 (+) 948 WP_070456750.1 LCP family protein -
  D5R78_RS01930 (D5R78_012655) - 421450..422925 (-) 1476 WP_119880921.1 alkaline phosphatase -
  D5R78_RS13280 - 423324..423494 (+) 171 WP_169301455.1 hypothetical protein -
  D5R78_RS01935 (D5R78_012650) - 423680..423844 (+) 165 WP_011274729.1 hypothetical protein -
  D5R78_RS01940 (D5R78_012645) braR 423874..424542 (+) 669 WP_037558332.1 response regulator transcription factor Regulator
  D5R78_RS01945 (D5R78_012640) braS 424545..425441 (+) 897 WP_119880918.1 sensor histidine kinase Regulator
  D5R78_RS01950 (D5R78_012635) - 425625..426374 (+) 750 WP_046308943.1 ABC transporter ATP-binding protein -
  D5R78_RS01955 (D5R78_012630) - 426376..428367 (+) 1992 WP_046308945.1 ABC transporter permease -
  D5R78_RS01960 (D5R78_012625) - 428456..429646 (+) 1191 WP_033079697.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34630.26 Da        Isoelectric Point: 6.3859

>NTDB_id=392507 D5R78_RS01945 WP_119880918.1 424545..425441(+) (braS) [Staphylococcus haemolyticus strain VB19458]
MLKAFIKSILNEIIIIITFILLFLLIFFLFNLPLSAFLLGAGIMLFIMIIYWLVQLSGFKEQVQMADTIQELEHELQQVK
SDQTEYQANVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVKINDL
VRPLIMKYSIQFIDQKTKIHYERCEDEVLTDAQWCSIMIEQILNNALKYARGKDIWITFDQQQHVLTIRDNGVGISQADL
PKIFDKGYSGYNGRLNANSSGIGLFIVKYISQHLHHLVDVQSELNKGTAFSIYFPKNN

Nucleotide


Download         Length: 897 bp        

>NTDB_id=392507 D5R78_RS01945 WP_119880918.1 424545..425441(+) (braS) [Staphylococcus haemolyticus strain VB19458]
ATGCTGAAAGCTTTTATTAAATCAATATTAAATGAAATCATTATAATCATCACATTTATATTGCTATTCTTACTTATCTT
CTTTCTATTTAATCTGCCATTGAGTGCGTTTCTATTAGGCGCCGGAATTATGCTATTCATCATGATAATTTATTGGTTAG
TTCAATTAAGTGGATTTAAAGAACAAGTACAGATGGCAGATACTATTCAAGAACTAGAGCATGAATTGCAACAGGTAAAA
AGTGATCAGACTGAATATCAAGCTAATGTGGAGAATTACTTCTTAACATGGGTTCATCAAATGAAGACACCTATTACAGC
ATCTAAATTGTTGTTAGAGCGTAATGAAGATAATGTCGTCAATCGAGTGCGGCAAGAAATTATTCAAATTGATAATTATA
CAAGTTTAGCGTTAAGTTATTTAAAATTGATGAACCAGGAAACGGATATGTCCTTTTCAAAAGTGAAGATTAATGACCTT
GTCCGTCCATTAATTATGAAATATTCTATTCAATTTATTGATCAGAAGACAAAGATTCATTATGAACGGTGTGAGGATGA
AGTTCTGACTGATGCACAATGGTGTTCAATAATGATTGAACAGATTCTAAATAATGCATTGAAGTATGCACGAGGTAAGG
ACATTTGGATTACGTTTGACCAACAACAGCATGTATTAACTATTCGTGATAATGGCGTCGGTATTAGTCAAGCTGACTTA
CCGAAGATCTTTGATAAAGGCTATTCAGGATATAATGGTCGATTGAATGCTAATTCATCAGGCATTGGATTGTTTATTGT
TAAATATATATCGCAACATTTACATCATCTTGTAGATGTACAGTCTGAGTTGAACAAAGGTACGGCATTTAGTATTTATT
TCCCGAAAAATAATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

62.671

97.987

0.614

Multiple sequence alignment