Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   GB851_RS05110 Genome accession   NZ_CP045141
Coordinates   984493..984945 (+) Length   150 a.a.
NCBI ID   WP_003787023.1    Uniprot ID   A0AAX2J405
Organism   Kingella kingae strain F41215CHC     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 979493..989945
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GB851_RS05085 (GB851_05240) - 979813..980970 (+) 1158 WP_164538151.1 glycerate kinase -
  GB851_RS05090 (GB851_05245) dapE 981007..982131 (+) 1125 WP_003790550.1 succinyl-diaminopimelate desuccinylase -
  GB851_RS05095 (GB851_05250) - 982198..982557 (-) 360 WP_003787016.1 Mth938-like domain-containing protein -
  GB851_RS05100 (GB851_05255) - 982657..983964 (+) 1308 WP_164538152.1 homoserine dehydrogenase -
  GB851_RS05105 (GB851_05260) - 983957..984436 (+) 480 WP_003787019.1 hypothetical protein -
  GB851_RS05110 (GB851_05265) recX 984493..984945 (+) 453 WP_003787023.1 recombination regulator RecX Regulator
  GB851_RS05115 (GB851_05270) - 985191..985631 (+) 441 WP_003790554.1 CZB domain-containing protein -
  GB851_RS05120 (GB851_05275) lon 985934..988360 (+) 2427 WP_003790555.1 endopeptidase La -
  GB851_RS05125 (GB851_05280) - 988551..988853 (+) 303 WP_003790557.1 HU family DNA-binding protein -
  GB851_RS05130 (GB851_05285) - 988910..989515 (-) 606 WP_038303458.1 hypothetical protein -

Sequence

Protein


Download         Length: 150 a.a.        Molecular weight: 17520.83 Da        Isoelectric Point: 9.8887

>NTDB_id=392280 GB851_RS05110 WP_003787023.1 984493..984945(+) (recX) [Kingella kingae strain F41215CHC]
MKTEKSLRARAMEMMSRREMSQAELRAKLLPHANDSDELDAVLAEFAKNNWQSDERFAEAFVRSKSSKHGAGRLRQELRQ
RGVSAELIQQYLPDRETELDNAIEVARKKFKQPAQNRQEWDKQMRFMLYRGFAMATAQAALKRAWADDEE

Nucleotide


Download         Length: 453 bp        

>NTDB_id=392280 GB851_RS05110 WP_003787023.1 984493..984945(+) (recX) [Kingella kingae strain F41215CHC]
ATGAAAACCGAAAAATCACTCCGCGCCCGAGCGATGGAAATGATGTCGCGCCGTGAAATGAGCCAAGCCGAATTACGCGC
TAAATTGTTGCCCCACGCCAACGATAGCGATGAATTGGACGCGGTGTTGGCAGAATTTGCGAAAAACAACTGGCAATCGG
ACGAGCGATTTGCAGAAGCGTTTGTTCGCAGCAAAAGCAGTAAACACGGCGCAGGACGTTTGCGCCAAGAATTGCGACAA
CGCGGCGTATCGGCAGAATTGATTCAGCAATATTTGCCCGACCGCGAAACAGAATTGGATAACGCAATAGAAGTCGCCCG
CAAAAAATTCAAGCAGCCTGCACAAAATCGGCAGGAATGGGACAAGCAAATGCGTTTTATGTTGTATCGCGGTTTTGCAA
TGGCAACGGCGCAGGCTGCTTTGAAACGCGCTTGGGCAGACGATGAAGAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(34-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

54.667

100

0.547

Multiple sequence alignment