Detailed information    

insolico Bioinformatically predicted

Overview

Name   recD2   Type   Machinery gene
Locus tag   BCELL_RS07675 Genome accession   NC_014829
Coordinates   1717899..1720190 (+) Length   763 a.a.
NCBI ID   WP_013488120.1    Uniprot ID   E6TV99
Organism   Evansella cellulosilytica DSM 2522     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1712899..1725190
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCELL_RS07650 (Bcell_1515) - 1713726..1714388 (+) 663 WP_013488115.1 YitT family protein -
  BCELL_RS07655 (Bcell_1516) - 1714372..1714791 (+) 420 WP_013488116.1 Rrf2 family transcriptional regulator -
  BCELL_RS07660 (Bcell_1517) - 1714926..1716065 (+) 1140 WP_013488117.1 cysteine desulfurase family protein -
  BCELL_RS07665 (Bcell_1518) mnmA 1716088..1717188 (+) 1101 WP_041808733.1 tRNA 2-thiouridine(34) synthase MnmA -
  BCELL_RS07670 (Bcell_1519) - 1717216..1717881 (+) 666 WP_013488119.1 tetratricopeptide repeat protein -
  BCELL_RS07675 (Bcell_1520) recD2 1717899..1720190 (+) 2292 WP_013488120.1 ATP-dependent RecD-like DNA helicase Machinery gene
  BCELL_RS07680 (Bcell_1521) - 1720216..1720689 (+) 474 WP_013488121.1 PRC-barrel domain-containing protein -
  BCELL_RS07685 (Bcell_1522) - 1720708..1720899 (+) 192 WP_013488122.1 hypothetical protein -
  BCELL_RS07690 (Bcell_1524) - 1721129..1722205 (+) 1077 WP_013488124.1 AI-2E family transporter -

Sequence

Protein


Download         Length: 763 a.a.        Molecular weight: 85971.27 Da        Isoelectric Point: 4.9055

>NTDB_id=39227 BCELL_RS07675 WP_013488120.1 1717899..1720190(+) (recD2) [Evansella cellulosilytica DSM 2522]
MVEDNQKDYIKGDLLHLIYHNEESLYTVAKIKVTETSYSMDDKEVAIVGIMPPIERDVSYLFYGFFSDHPRFGRQYKVEQ
FHKIMPETEQGIILYLSSDRFPGIGKKTAEKIVQTLGKNAISIIIENRSSLDKVTSIKRDKADEIYETLLEDQGIEQVLV
RLYEYGFGLQLAMKVYQAYKTDALDIINHNPYKMIEDVEGIGFAKADLIGRKQGIEGAHPDRLRAAIIFTLNEQSLNEGH
VYVLNETIVKGAKALLEYENTEEISPLKIADQVIELGEEGKVIVDGDKMYIPTLYYAEQGIVSNIQRLLEREPEKYPDSE
FYKALGLVEETLGIHYAPSQQEAIKEALHSPVMILTGGPGTGKTTVIKGLVEVYGQLNGMSVNPDDYAKKDAFPIIMAAP
TGRAAKRMSESTGLPSSTIHRLLGFKGTEDYEDDEVEKLEGELIILDEMSMVDTWLANQLFKAIPNDMKVILVGDEDQLP
SVGPGQVLSDLLTTNIVPSVKLTDIYRQSEGSHIITFSHSVKDGHLDQVKKDSKDLRFFPAAQQQIPDVVKQICKGAIAK
GYEPKDIQVLAPMYRGIAGVENLNVMLQSLFNPPTPQRREVPFGDVVYRTGDIVLQLVNNPEENVFNGDRGEIVAIFTEK
ENTDKELKIVISFDGIEITYTKQELTQITHAYCCSIHKSQGSEFPIVIMPIVKGYYRMLRKKLIYTGITRAKNFLLLCGE
WQSLEYAVKNDQDIKRNTTLALKLKNEPMENEYQHETDGASKH

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=39227 BCELL_RS07675 WP_013488120.1 1717899..1720190(+) (recD2) [Evansella cellulosilytica DSM 2522]
ATGGTAGAGGACAATCAAAAGGATTATATTAAAGGTGATTTGCTCCATTTAATTTATCATAATGAGGAATCGCTTTATAC
GGTAGCAAAAATCAAAGTAACAGAAACGTCATATTCCATGGACGATAAAGAGGTGGCGATAGTTGGTATTATGCCACCAA
TTGAAAGAGATGTTAGCTACCTTTTTTATGGTTTCTTTTCAGATCACCCGCGATTTGGCCGTCAATATAAAGTGGAGCAA
TTTCATAAGATTATGCCTGAAACGGAGCAAGGGATTATTTTATACCTTTCTAGTGATCGTTTTCCTGGTATCGGTAAGAA
GACTGCTGAAAAGATCGTTCAAACATTAGGGAAGAATGCCATTTCGATCATTATTGAAAATCGTTCTTCACTGGACAAAG
TAACGAGTATTAAACGTGATAAAGCTGATGAAATTTATGAGACACTACTAGAAGATCAGGGGATTGAACAAGTATTAGTA
AGGCTATATGAATATGGGTTTGGCTTACAGCTAGCTATGAAAGTATACCAAGCTTATAAAACTGATGCTTTGGATATCAT
TAATCACAACCCTTATAAGATGATTGAAGATGTAGAGGGAATTGGCTTTGCTAAAGCTGACTTAATTGGCAGAAAACAAG
GGATTGAAGGAGCACATCCTGACCGATTAAGGGCAGCGATTATTTTTACCTTAAATGAGCAATCTCTCAACGAGGGACAC
GTGTATGTTTTAAATGAGACGATTGTTAAAGGAGCAAAGGCTTTACTAGAGTATGAAAACACCGAAGAGATATCTCCATT
AAAAATAGCTGATCAAGTTATTGAATTAGGCGAAGAAGGTAAGGTTATCGTTGATGGAGATAAAATGTATATACCTACGT
TATATTATGCTGAACAAGGAATTGTGTCTAACATACAACGGTTATTGGAGAGAGAACCAGAAAAGTATCCAGATTCGGAG
TTTTATAAAGCGCTTGGATTAGTAGAGGAAACGCTTGGCATTCATTATGCACCATCACAGCAGGAGGCAATAAAAGAAGC
GCTTCATTCCCCGGTTATGATTTTGACAGGAGGGCCGGGAACTGGAAAAACAACAGTAATAAAAGGGCTCGTTGAAGTTT
ATGGACAATTAAACGGTATGTCTGTAAACCCTGATGATTATGCTAAAAAAGATGCTTTTCCTATAATAATGGCGGCACCT
ACAGGAAGAGCAGCTAAACGAATGAGTGAATCAACTGGCTTACCTTCTTCAACGATCCATCGCTTACTCGGTTTTAAAGG
TACCGAAGATTATGAAGACGATGAGGTAGAAAAACTAGAGGGAGAGCTCATTATTTTAGATGAAATGTCGATGGTCGATA
CGTGGCTAGCTAACCAATTGTTCAAAGCAATTCCGAATGACATGAAAGTAATACTAGTCGGTGATGAGGATCAATTACCA
TCTGTTGGTCCAGGACAAGTATTATCGGATTTATTAACTACTAACATCGTTCCTTCAGTAAAATTAACAGACATTTATCG
TCAATCAGAAGGCTCTCATATTATCACCTTTTCCCATTCAGTGAAAGATGGTCACTTAGATCAAGTCAAAAAAGATAGTA
AAGATTTACGCTTTTTCCCGGCTGCACAGCAACAAATTCCAGATGTAGTAAAGCAAATATGTAAAGGCGCAATAGCGAAA
GGGTATGAACCTAAAGATATCCAAGTGTTAGCTCCGATGTACCGTGGAATTGCAGGAGTAGAAAATTTAAACGTCATGCT
ACAATCACTATTTAATCCCCCAACACCACAAAGAAGGGAAGTTCCTTTTGGGGATGTTGTTTATCGAACTGGTGATATTG
TACTCCAATTAGTGAACAATCCTGAAGAAAATGTATTTAATGGAGACCGTGGCGAAATTGTTGCAATATTTACTGAAAAA
GAAAATACAGATAAAGAGTTAAAAATTGTCATTTCTTTTGATGGGATAGAAATTACCTATACAAAACAAGAATTAACACA
AATTACACATGCCTATTGCTGCTCTATTCATAAGTCACAAGGCAGTGAATTCCCAATCGTCATTATGCCGATTGTAAAGG
GATACTATCGTATGCTCCGAAAAAAATTAATTTATACGGGAATTACGAGGGCTAAAAACTTTCTTTTACTATGTGGTGAA
TGGCAATCACTTGAATATGCTGTAAAAAATGACCAAGATATAAAACGGAACACGACGTTGGCTTTAAAATTAAAAAATGA
ACCGATGGAAAATGAATACCAGCATGAAACTGATGGTGCATCCAAACACTAG

Domains

Predicted by InterproScan.

AAA domain (AAA_30)

(336-529)

UvrD-like helicase C-terminal domain (UvrD_C_2)

(670-718)

ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13)

(583-649)

Helix-hairpin-helix containing domain (HHH_RecD2)

(152-242)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E6TV99

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recD2 Bacillus subtilis subsp. subtilis str. 168

53.711

97.117

0.522

Multiple sequence alignment