Detailed information
Overview
| Name | xcpW | Type | Machinery gene |
| Locus tag | GA721_RS07700 | Genome accession | NZ_CP045131 |
| Coordinates | 1634787..1635422 (-) | Length | 211 a.a. |
| NCBI ID | WP_160243268.1 | Uniprot ID | - |
| Organism | Acinetobacter indicus strain TQ18 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1629787..1640422
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GA721_RS07670 | - | 1630173..1630604 (-) | 432 | WP_104473640.1 | SRPBCC family protein | - |
| GA721_RS07675 | tadA | 1630662..1631183 (-) | 522 | WP_104488986.1 | tRNA adenosine(34) deaminase TadA | - |
| GA721_RS07680 | - | 1631187..1632311 (-) | 1125 | WP_005177517.1 | enoyl-CoA hydratase/isomerase family protein | - |
| GA721_RS07685 | ung | 1632308..1633021 (-) | 714 | WP_005177514.1 | uracil-DNA glycosylase | - |
| GA721_RS07690 | - | 1633063..1633659 (-) | 597 | WP_005177512.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| GA721_RS07695 | gspK | 1633807..1634754 (-) | 948 | WP_160243266.1 | type II secretion system minor pseudopilin GspK | - |
| GA721_RS07700 | xcpW | 1634787..1635422 (-) | 636 | WP_160243268.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| GA721_RS07705 | xcpV | 1635419..1635763 (-) | 345 | WP_035363078.1 | type II secretion system protein | Machinery gene |
| GA721_RS07710 | - | 1635906..1636478 (-) | 573 | WP_160243270.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| GA721_RS07715 | - | 1636484..1637098 (-) | 615 | WP_160243272.1 | TetR/AcrR family transcriptional regulator | - |
| GA721_RS07720 | - | 1637159..1637932 (-) | 774 | WP_005177502.1 | TatD family hydrolase | - |
| GA721_RS07725 | - | 1637962..1638303 (-) | 342 | WP_160243274.1 | PilZ domain-containing protein | - |
| GA721_RS07730 | - | 1638315..1639298 (-) | 984 | WP_005177500.1 | DNA polymerase III, delta' subunit | - |
| GA721_RS07735 | kdsB | 1639307..1640071 (-) | 765 | WP_104472237.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 24163.47 Da Isoelectric Point: 6.4849
>NTDB_id=392175 GA721_RS07700 WP_160243268.1 1634787..1635422(-) (xcpW) [Acinetobacter indicus strain TQ18]
MIKAKRGFTLVELLVAIAIFAVLSALGWKVFDYLVKVKDRNQWHEQQLEGLQGAYQQILRDSIQIVPLTANINNDIQPAL
VLQNGRFNFSKTGVTDPLQQGIAPTERIEYQYRADEQKLYRLKYANLHQSGQDQPVSSILLDNVSQFQVSVLNPQELSNW
PDSSIDLNDDQQKRKLPKGIKINLTVQDVQYEWIFSLLNTDFLKSDNKTTS
MIKAKRGFTLVELLVAIAIFAVLSALGWKVFDYLVKVKDRNQWHEQQLEGLQGAYQQILRDSIQIVPLTANINNDIQPAL
VLQNGRFNFSKTGVTDPLQQGIAPTERIEYQYRADEQKLYRLKYANLHQSGQDQPVSSILLDNVSQFQVSVLNPQELSNW
PDSSIDLNDDQQKRKLPKGIKINLTVQDVQYEWIFSLLNTDFLKSDNKTTS
Nucleotide
Download Length: 636 bp
>NTDB_id=392175 GA721_RS07700 WP_160243268.1 1634787..1635422(-) (xcpW) [Acinetobacter indicus strain TQ18]
ATGATTAAGGCTAAACGCGGATTTACCCTGGTCGAGCTGCTGGTGGCCATTGCCATCTTTGCGGTGCTGTCTGCCTTGGG
CTGGAAAGTATTTGATTATCTGGTCAAGGTCAAAGACCGTAACCAGTGGCATGAACAGCAGTTAGAAGGACTGCAGGGTG
CCTATCAACAAATCTTGCGCGATAGTATTCAGATTGTACCGCTGACCGCAAACATCAATAATGATATTCAGCCAGCTTTG
GTATTACAAAACGGCCGTTTTAATTTTAGCAAGACCGGTGTGACCGATCCTTTGCAGCAGGGCATTGCCCCCACTGAACG
GATTGAATATCAGTACCGGGCCGATGAACAAAAACTGTATCGTCTGAAATATGCCAATTTGCATCAGTCCGGGCAGGATC
AGCCGGTTTCCAGCATATTGTTGGACAATGTTAGCCAGTTTCAGGTCAGTGTGCTGAATCCGCAGGAGCTGAGTAACTGG
CCAGACAGCAGTATTGATTTAAATGATGATCAGCAAAAACGCAAACTGCCAAAAGGCATTAAAATAAATTTAACCGTACA
AGATGTACAATATGAATGGATTTTTAGCCTGTTAAATACTGACTTCCTGAAATCAGACAATAAAACCACATCATAA
ATGATTAAGGCTAAACGCGGATTTACCCTGGTCGAGCTGCTGGTGGCCATTGCCATCTTTGCGGTGCTGTCTGCCTTGGG
CTGGAAAGTATTTGATTATCTGGTCAAGGTCAAAGACCGTAACCAGTGGCATGAACAGCAGTTAGAAGGACTGCAGGGTG
CCTATCAACAAATCTTGCGCGATAGTATTCAGATTGTACCGCTGACCGCAAACATCAATAATGATATTCAGCCAGCTTTG
GTATTACAAAACGGCCGTTTTAATTTTAGCAAGACCGGTGTGACCGATCCTTTGCAGCAGGGCATTGCCCCCACTGAACG
GATTGAATATCAGTACCGGGCCGATGAACAAAAACTGTATCGTCTGAAATATGCCAATTTGCATCAGTCCGGGCAGGATC
AGCCGGTTTCCAGCATATTGTTGGACAATGTTAGCCAGTTTCAGGTCAGTGTGCTGAATCCGCAGGAGCTGAGTAACTGG
CCAGACAGCAGTATTGATTTAAATGATGATCAGCAAAAACGCAAACTGCCAAAAGGCATTAAAATAAATTTAACCGTACA
AGATGTACAATATGAATGGATTTTTAGCCTGTTAAATACTGACTTCCTGAAATCAGACAATAAAACCACATCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpW | Acinetobacter baumannii D1279779 |
61.735 |
92.891 |
0.573 |