Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   GA646_RS04690 Genome accession   NZ_CP045127
Coordinates   809034..813530 (+) Length   1498 a.a.
NCBI ID   WP_160255498.1    Uniprot ID   -
Organism   Acinetobacter indicus strain XG03     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 804034..818530
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GA646_RS04665 - 804239..805201 (+) 963 WP_075175708.1 IS30-like element IS18 family transposase -
  GA646_RS04670 pilG 805450..805834 (+) 385 Protein_741 twitching motility response regulator PilG -
  GA646_RS04675 - 805851..806219 (+) 369 WP_005179539.1 PleD family two-component system response regulator -
  GA646_RS04680 - 806223..806759 (+) 537 Protein_743 chemotaxis protein CheW -
  GA646_RS04685 - 806805..808877 (+) 2073 Protein_744 methyl-accepting chemotaxis protein -
  GA646_RS04690 chpA 809034..813530 (+) 4497 WP_160255498.1 Hpt domain-containing protein Regulator
  GA646_RS04695 - 813527..813988 (+) 462 WP_075167114.1 hypothetical protein -
  GA646_RS04700 dapE 814058..815191 (-) 1134 WP_005179534.1 succinyl-diaminopimelate desuccinylase -
  GA646_RS04705 - 815319..815465 (-) 147 WP_005179532.1 entericidin A/B family lipoprotein -
  GA646_RS04710 - 815566..816468 (-) 903 WP_104484251.1 DUF1853 family protein -
  GA646_RS04715 - 816559..816948 (+) 390 WP_075167111.1 YbaN family protein -
  GA646_RS04720 elsL 816945..817475 (+) 531 WP_005179524.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1498 a.a.        Molecular weight: 167010.43 Da        Isoelectric Point: 4.2927

>NTDB_id=392087 GA646_RS04690 WP_160255498.1 809034..813530(+) (chpA) [Acinetobacter indicus strain XG03]
MKEILKNLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELKDLLAQWATQPNDQETLTTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVISGSLTLSAQVQQFATAVANVFEYKLYPSFKHAQPMALDLRPLVLLGQQLQQNLSPEPALEELLQL
ASSLTSSDSITGLEFDTASTDEQVAVDAELAVADSVEEDPLAAETLAIFIEEAEEHLLTVDRFLAHDELKTQDYNGLIRA
LHTLRGSSSMAHIEQIFDASSKVENLFKTLLQDEIESTSKETALLLQYAEFVRDYLHLLPQNDSAGMDRIYQTFNTAWQN
YGFSLEDVDESVNPQGLVSKLIELNIDQLLDAEFEFDQRAQAEYPEYIQTLSHQAKLLVERTDNRASQGIHDFTQELQLA
YAALLDKPSLLHSDYAFELFGQAHQEFIHLFDTLAAGQRVSLSEDAQKIINNLSAFVQQDIEALSPETDTTEAVTETAEV
GAGLNLAVLSQRLEADRQYMDSAEANKDFDPDLLDIFLEEAEELLTGIDQDVNSWSQDPSNTAALNNLMRHLHTLKGGAN
MIAASHIGLIAHHLETIYERIINRQMNASTALIQIIRLVQDNIADRIQTIREQQVDYPAQESLAILENISELAQGQLVEA
ESLAVAAEATSSADVQQFDAAALEFELEQPTPAETAYAAPEDEQQPDNSSEPVLEDAPTLAEQSIPTDAVSTTENDGEDN
LHSIVEETFLEEAEELLDTTESLLKQWFDHRSDRSILLQLQRAAHSLKGGARMAEIEPVAVIAYQLENTFEQFAVHQFNS
NAYDALLNTTVAWLKEAIFQRDYSNFDSLKASLESIEYVNATAQLPERFNTADLLAPSKTFEFVQGDGAEPPSMQGEWSE
TAQLDNSNEMIRISADLVEKMIDLSGENAINRSRIEMELGQLGGTLNEMELAIKRLADQLRRMEGELESQIIAKHGDEHS
RYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLADKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRI
VRQTSSTLNRPAELVVHNTEGELDRTILERLISPFEHMLRNAVDHGLEDAAVRKQAAKPEVGQIELNIGRQGTDVLISFT
DDGKGIDETKIHAKALSLGLIQPEQQLDKKEILQLIFHPGFSTAQAVTQISGRGVGLDVVQSEIKALGGHVEVDSELGKG
TTFSIRVPTTVAVSDALMVKVGDQQFAIPLAQIDRIVRISPSALESYFSSKDDYFKIDQQNYKLRYLSEFVANQPLPRLS
NIAHSLPVLLIKGNTGQTIALLVDQLIGSRGQIVMKSIGQQFSSVGSIAGATILGDGQVCLILDGQNIARQIQATQRIKH
VMEPREVQRRDTRRLVMIVDDSVTVRKVTSRLLERQGFDVVTAKDGVDAIEQLENVKPDLMLLDIEMPRMDGFEVTNLVR
HHDIHRDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIENILHSSEAKA

Nucleotide


Download         Length: 4497 bp        

>NTDB_id=392087 GA646_RS04690 WP_160255498.1 809034..813530(+) (chpA) [Acinetobacter indicus strain XG03]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACTGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTCT
AGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGCTAAAAGACCTGTTGGCTCAATGGGCCACGCAGCCTAACG
ATCAGGAAACGCTAACCACCATTCGCCGTCATTTTCATACCTTAAAAGGTTCGGGACGTATGGTTGGGGCCAAGTCGGCA
GGGGAGCTGGCCTGGACGGTTGAAGATACCTTAAACCGGGTCATTTCCGGTAGTTTGACCCTGTCAGCGCAGGTGCAGCA
GTTTGCAACCGCGGTGGCGAACGTCTTTGAATACAAACTTTATCCAAGCTTTAAACATGCCCAGCCGATGGCACTGGATC
TGCGTCCATTGGTGCTGTTAGGACAACAATTACAACAAAATTTAAGTCCTGAACCGGCCTTAGAAGAACTTCTACAACTG
GCGAGCAGCTTAACATCCAGCGACAGTATTACTGGTCTGGAGTTTGATACAGCAAGCACTGATGAGCAGGTTGCTGTAGA
TGCCGAGCTGGCTGTGGCTGATAGTGTTGAAGAAGATCCGCTAGCAGCTGAAACACTGGCCATCTTTATTGAAGAAGCAG
AAGAACACCTGTTAACGGTGGACCGCTTCCTGGCACACGATGAGCTGAAAACCCAAGATTACAATGGCCTGATTCGTGCC
CTGCATACCTTGCGCGGCAGTTCATCCATGGCACACATCGAGCAGATTTTTGATGCCAGCTCCAAGGTCGAAAACCTGTT
CAAGACCCTGTTACAGGATGAAATTGAATCGACCTCCAAAGAAACCGCACTGTTATTGCAATATGCTGAATTTGTGCGGG
ATTATCTGCATCTGTTGCCGCAGAATGACAGTGCCGGCATGGACCGGATTTATCAGACTTTCAATACTGCATGGCAGAAC
TATGGCTTTAGCCTGGAAGATGTTGATGAATCAGTGAATCCGCAAGGTCTGGTATCCAAGCTGATTGAACTGAATATTGA
TCAGTTGCTCGATGCTGAGTTCGAATTTGACCAGCGCGCGCAGGCTGAATATCCGGAATATATCCAGACCCTGAGCCATC
AGGCGAAGCTGCTGGTAGAGCGTACCGATAACCGCGCCTCTCAGGGTATTCATGATTTTACCCAGGAATTACAACTAGCC
TATGCGGCCTTGCTGGACAAGCCAAGCCTGCTGCATAGCGATTATGCCTTTGAATTATTTGGACAGGCGCATCAGGAATT
TATCCATCTGTTTGATACCCTGGCTGCCGGACAACGCGTCAGCTTAAGCGAAGACGCCCAGAAGATCATCAATAACCTGA
GTGCCTTTGTACAGCAGGATATTGAAGCGCTAAGCCCAGAAACTGATACCACAGAAGCTGTAACCGAAACGGCTGAAGTC
GGTGCAGGGCTGAATCTGGCCGTATTGTCACAGCGTCTGGAAGCTGACCGTCAATACATGGACAGCGCTGAAGCCAACAA
GGACTTTGATCCAGACCTGCTGGACATTTTCCTGGAAGAAGCCGAAGAGTTACTTACGGGTATTGACCAGGATGTTAACA
GCTGGAGTCAGGACCCGAGCAATACTGCTGCGCTGAACAATCTGATGCGCCATCTGCACACTTTAAAAGGTGGCGCCAAC
ATGATTGCAGCCAGCCATATCGGTCTGATTGCGCACCATTTAGAAACCATTTATGAGCGCATCATTAACCGTCAAATGAA
TGCATCAACCGCATTGATCCAGATTATCCGTCTGGTTCAGGACAATATTGCGGACCGTATCCAGACCATCCGTGAACAGC
AGGTCGATTATCCGGCGCAGGAATCACTGGCGATTCTGGAAAATATTAGCGAACTGGCCCAAGGTCAACTGGTTGAAGCT
GAATCGCTGGCAGTGGCAGCTGAAGCAACCTCTAGCGCAGATGTACAACAGTTTGATGCAGCTGCACTTGAGTTTGAGCT
GGAACAGCCAACACCTGCAGAAACAGCCTATGCTGCGCCTGAAGATGAGCAGCAGCCAGATAATAGCAGCGAACCGGTAC
TGGAAGATGCGCCGACCCTGGCTGAGCAGAGCATCCCTACAGACGCGGTATCTACTACTGAAAATGACGGTGAAGACAAT
CTGCATTCGATTGTGGAAGAAACCTTCCTGGAAGAAGCTGAAGAGCTGCTCGACACCACAGAAAGCCTGTTAAAGCAGTG
GTTTGACCATCGTAGTGACCGAAGCATTTTGCTGCAGTTACAACGTGCTGCGCACAGCCTGAAAGGCGGCGCGCGTATGG
CCGAAATCGAGCCGGTGGCCGTGATTGCTTATCAGCTGGAAAATACCTTTGAACAGTTCGCGGTGCATCAGTTTAATTCC
AATGCCTATGATGCCTTGCTCAACACCACTGTGGCCTGGTTAAAAGAAGCCATCTTCCAGCGCGATTACAGCAATTTTGA
TAGCCTGAAAGCCAGCCTGGAGTCGATTGAATACGTCAATGCGACGGCGCAGCTGCCAGAACGCTTCAATACCGCCGATC
TGCTGGCGCCAAGCAAAACCTTCGAATTTGTGCAGGGTGATGGTGCCGAGCCGCCATCCATGCAGGGCGAATGGAGCGAA
ACCGCACAGCTGGATAACAGCAATGAGATGATCCGTATTTCGGCTGATCTGGTTGAGAAGATGATTGACCTGTCGGGTGA
AAACGCGATTAACCGCTCGCGAATCGAGATGGAGCTGGGTCAGCTGGGCGGTACCCTGAATGAAATGGAACTGGCGATTA
AACGTCTGGCCGATCAGTTACGCCGAATGGAAGGCGAGCTGGAAAGCCAGATTATTGCCAAACATGGTGATGAACATTCA
CGCTATACCGACTTCGACCCGCTGGAGATGGACCAGTATTCATCCTTGAACCAGCTGTCGAAATCGTTGGCGGAATCGGC
GTCGGACTTGGTGGACTTTAAGACCACGCTGGCGGACAAGATTCGTGATGCTGAAGGTCTGTTACTGCAACAGTCGCGGA
TTCAGGCAGAAATTCAGGAAAGCCTGATGCGCACCCGTCTGGTACCGTTCTCGCGCATGTTGCCACGTTTACAGCGGATT
GTGCGTCAGACTTCATCGACCTTAAACCGTCCTGCCGAGCTGGTGGTACACAATACCGAAGGCGAGCTGGACCGGACTAT
TCTGGAACGCCTGATTTCACCATTTGAACACATGCTGCGTAATGCGGTGGACCATGGCCTGGAAGATGCCGCTGTACGTA
AACAGGCAGCGAAGCCGGAAGTGGGCCAGATTGAGCTGAACATTGGCCGTCAGGGCACTGATGTACTGATTAGCTTTACC
GATGATGGTAAGGGGATTGATGAAACCAAAATTCACGCCAAAGCCCTGAGCCTTGGCCTGATTCAGCCAGAGCAACAGCT
GGACAAGAAAGAAATTCTGCAGCTGATTTTCCATCCGGGCTTTAGTACCGCACAGGCCGTGACCCAGATTTCGGGTCGTG
GCGTCGGTCTGGACGTGGTGCAAAGCGAAATTAAAGCGCTGGGCGGCCATGTCGAGGTCGATTCTGAACTCGGTAAAGGC
ACTACTTTCAGTATTCGCGTACCGACCACAGTGGCGGTATCCGATGCCTTGATGGTAAAAGTTGGCGATCAGCAGTTCGC
AATTCCATTGGCGCAAATTGACCGTATTGTACGAATTTCACCTTCTGCGCTGGAAAGTTACTTCAGCAGCAAAGATGACT
ACTTCAAGATTGATCAGCAAAACTATAAGTTGCGCTATCTGTCCGAGTTTGTTGCCAATCAGCCATTGCCGCGTTTAAGC
AATATCGCGCATTCATTGCCGGTGCTGCTGATTAAAGGCAATACTGGTCAGACCATTGCCTTACTGGTCGATCAGCTGAT
TGGTTCACGTGGCCAGATTGTGATGAAATCGATTGGGCAGCAGTTCTCCAGCGTGGGTTCGATTGCCGGCGCGACCATTC
TCGGTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGATTCAGGCAACCCAGCGCATCAAGCAT
GTGATGGAGCCGCGTGAAGTACAGCGTCGTGATACCCGTCGTCTGGTGATGATTGTGGATGACTCGGTGACCGTACGTAA
GGTCACGTCACGTCTGCTCGAACGTCAGGGCTTTGATGTGGTCACGGCCAAAGACGGTGTCGATGCGATTGAGCAGCTGG
AAAATGTTAAACCGGATCTGATGCTGCTGGATATTGAAATGCCGCGTATGGATGGCTTTGAGGTGACCAACCTGGTACGC
CACCATGACATCCATCGTGACTTGCCAATTATCATGATTACCTCGCGTACCGGTGAAAAACACCGCGAACGTGCCTTTAG
CTTGGGGGTAACGCACTATATGGGTAAACCGTTCCAGGAAGCAGAATTGCTTGCCAATATTGAAAACATTTTGCATAGCA
GTGAGGCTAAAGCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.104

100

0.621


Multiple sequence alignment