Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | FQU82_RS09505 | Genome accession | NZ_CP045110 |
| Coordinates | 1936243..1936623 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain ATCC 19606 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1931243..1941623
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FQU82_RS09475 (FQU82_01863) | kdsB | 1932146..1932907 (+) | 762 | WP_000680698.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| FQU82_RS09480 (FQU82_01864) | - | 1932919..1933899 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| FQU82_RS09485 (FQU82_01865) | - | 1933911..1934252 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| FQU82_RS09490 (FQU82_01866) | - | 1934270..1935043 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| FQU82_RS09495 (FQU82_01867) | - | 1935081..1935689 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| FQU82_RS09500 (FQU82_01868) | - | 1935699..1936253 (+) | 555 | WP_000841370.1 | type II secretion system protein | - |
| FQU82_RS09505 (FQU82_01869) | xcpV | 1936243..1936623 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| FQU82_RS09510 (FQU82_01870) | xcpW | 1936623..1937324 (+) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| FQU82_RS09515 (FQU82_01871) | gspK | 1937324..1938283 (+) | 960 | WP_000301461.1 | type II secretion system minor pseudopilin GspK | - |
| FQU82_RS09520 (FQU82_01872) | - | 1938513..1939109 (+) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| FQU82_RS09525 (FQU82_01873) | ung | 1939160..1939873 (+) | 714 | WP_001177525.1 | uracil-DNA glycosylase | - |
| FQU82_RS09530 (FQU82_01874) | - | 1939870..1940994 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| FQU82_RS09535 (FQU82_01875) | tadA | 1941001..1941504 (+) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=391995 FQU82_RS09505 WP_000836911.1 1936243..1936623(+) (xcpV) [Acinetobacter baumannii strain ATCC 19606]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=391995 FQU82_RS09505 WP_000836911.1 1936243..1936623(+) (xcpV) [Acinetobacter baumannii strain ATCC 19606]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |