Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | FQU82_RS04635 | Genome accession | NZ_CP045110 |
| Coordinates | 934379..935497 (-) | Length | 372 a.a. |
| NCBI ID | WP_000347036.1 | Uniprot ID | A0A009PAD6 |
| Organism | Acinetobacter baumannii strain ATCC 19606 | ||
| Function | mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 898920..966072 | 934379..935497 | within | 0 |
Gene organization within MGE regions
Location: 898920..966072
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FQU82_RS04460 (FQU82_00861) | - | 899321..899881 (-) | 561 | WP_001048354.1 | hypothetical protein | - |
| FQU82_RS04465 (FQU82_00862) | - | 899972..900832 (-) | 861 | WP_000838088.1 | pirin family protein | - |
| FQU82_RS04470 (FQU82_00863) | hemJ | 901003..901455 (-) | 453 | WP_000339889.1 | protoporphyrinogen oxidase HemJ | - |
| FQU82_RS04475 (FQU82_00864) | - | 901474..902703 (-) | 1230 | WP_000832710.1 | beta-ketoacyl-ACP synthase II | - |
| FQU82_RS04480 (FQU82_00865) | - | 903000..904325 (+) | 1326 | WP_000160010.1 | EcsC family protein | - |
| FQU82_RS04485 (FQU82_00866) | rpsL | 904526..904900 (+) | 375 | WP_000246374.1 | 30S ribosomal protein S12 | - |
| FQU82_RS04490 (FQU82_00867) | rpsG | 905060..905530 (+) | 471 | WP_001138055.1 | 30S ribosomal protein S7 | - |
| FQU82_RS04495 (FQU82_00868) | fusA | 905709..907847 (+) | 2139 | WP_000113824.1 | elongation factor G | - |
| FQU82_RS04500 (FQU82_00869) | tuf | 907942..909132 (+) | 1191 | WP_001029610.1 | elongation factor Tu | - |
| FQU82_RS04505 (FQU82_00870) | - | 909336..910217 (+) | 882 | WP_000992301.1 | metal-dependent hydrolase | - |
| FQU82_RS04510 (FQU82_00871) | - | 910454..911329 (+) | 876 | WP_000992291.1 | metal-dependent hydrolase | - |
| FQU82_RS04515 (FQU82_00872) | rimI | 911437..911892 (+) | 456 | WP_000621546.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| FQU82_RS04520 (FQU82_00873) | - | 911937..912752 (-) | 816 | WP_000844343.1 | arginyltransferase | - |
| FQU82_RS04525 (FQU82_00874) | aat | 912771..913502 (-) | 732 | WP_000854789.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
| FQU82_RS04530 (FQU82_00875) | trxB | 913623..914570 (-) | 948 | WP_001276144.1 | thioredoxin-disulfide reductase | - |
| FQU82_RS04535 (FQU82_00876) | - | 914840..917872 (+) | 3033 | WP_000127835.1 | DNA translocase FtsK | - |
| FQU82_RS04540 (FQU82_00877) | rhtC | 918021..918641 (+) | 621 | WP_000959259.1 | threonine export protein RhtC | - |
| FQU82_RS04545 (FQU82_00878) | - | 918684..918971 (-) | 288 | WP_001218560.1 | PA4642 family protein | - |
| FQU82_RS04550 (FQU82_00879) | minE | 919055..919327 (-) | 273 | WP_000896934.1 | cell division topological specificity factor MinE | - |
| FQU82_RS04555 (FQU82_00880) | minD | 919330..920142 (-) | 813 | WP_001074362.1 | septum site-determining protein MinD | - |
| FQU82_RS04560 (FQU82_00881) | minC | 920213..920935 (-) | 723 | WP_000763677.1 | septum site-determining protein MinC | - |
| FQU82_RS04565 (FQU82_00882) | - | 921057..922103 (-) | 1047 | WP_001181637.1 | hypothetical protein | - |
| FQU82_RS04570 (FQU82_00883) | - | 922120..923046 (-) | 927 | WP_000100975.1 | acyltransferase | - |
| FQU82_RS04575 (FQU82_00884) | - | 923291..923944 (+) | 654 | WP_001202415.1 | OmpA family protein | - |
| FQU82_RS04580 (FQU82_00885) | rep | 924138..926177 (+) | 2040 | WP_000093035.1 | DNA helicase Rep | - |
| FQU82_RS04585 (FQU82_00886) | dut | 926203..926655 (+) | 453 | WP_000868152.1 | dUTP diphosphatase | - |
| FQU82_RS04590 (FQU82_00887) | - | 926855..928273 (+) | 1419 | WP_001102833.1 | phosphomannomutase/phosphoglucomutase | - |
| FQU82_RS04595 (FQU82_00888) | argB | 928288..929196 (+) | 909 | WP_001135419.1 | acetylglutamate kinase | - |
| FQU82_RS04600 (FQU82_00889) | - | 929317..930099 (+) | 783 | WP_000890283.1 | GNAT family N-acetyltransferase | - |
| FQU82_RS04605 (FQU82_00890) | - | 930208..931056 (+) | 849 | WP_000336554.1 | class II glutamine amidotransferase | - |
| FQU82_RS04610 (FQU82_00891) | - | 931309..931764 (+) | 456 | WP_000782976.1 | bacteriohemerythrin | - |
| FQU82_RS04615 (FQU82_00892) | - | 931917..932984 (+) | 1068 | WP_005144332.1 | hypothetical protein | - |
| FQU82_RS04620 (FQU82_00893) | - | 932984..933307 (+) | 324 | WP_000442584.1 | RnfH family protein | - |
| FQU82_RS04625 (FQU82_00894) | - | 933362..933760 (-) | 399 | WP_001170994.1 | outer membrane protein assembly factor BamE | - |
| FQU82_RS04630 (FQU82_00895) | fur | 933872..934309 (+) | 438 | WP_001122847.1 | ferric iron uptake transcriptional regulator | - |
| FQU82_RS04635 (FQU82_00896) | pilU | 934379..935497 (-) | 1119 | WP_000347036.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| FQU82_RS04640 (FQU82_00897) | pilT | 935525..936562 (-) | 1038 | WP_000355489.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| FQU82_RS04645 (FQU82_00898) | - | 936689..937381 (+) | 693 | WP_001108520.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| FQU82_RS04650 (FQU82_00899) | - | 937582..941178 (-) | 3597 | WP_000698801.1 | AAA family ATPase | - |
| FQU82_RS04655 (FQU82_00900) | - | 941188..942456 (-) | 1269 | WP_001984248.1 | exonuclease SbcCD subunit D | - |
| FQU82_RS04660 (FQU82_00901) | - | 942621..943094 (+) | 474 | WP_002134289.1 | OsmC family protein | - |
| FQU82_RS04665 (FQU82_00902) | - | 943168..943545 (-) | 378 | WP_001059437.1 | VOC family protein | - |
| FQU82_RS04670 (FQU82_00903) | - | 943925..944377 (+) | 453 | WP_000164154.1 | ABZJ_00895 family protein | - |
| FQU82_RS04675 (FQU82_00904) | - | 944466..945371 (+) | 906 | WP_001039359.1 | TIGR01777 family oxidoreductase | - |
| FQU82_RS04680 (FQU82_00905) | - | 945363..946478 (-) | 1116 | WP_000546700.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| FQU82_RS04685 (FQU82_00906) | hemB | 946504..947517 (-) | 1014 | WP_000222569.1 | porphobilinogen synthase | - |
| FQU82_RS04690 (FQU82_00907) | - | 947660..948157 (+) | 498 | WP_002019577.1 | thioesterase family protein | - |
| FQU82_RS04695 (FQU82_00908) | - | 948427..949578 (+) | 1152 | WP_000128703.1 | EmrA/EmrK family multidrug efflux transporter periplasmic adaptor subunit | - |
| FQU82_RS04700 (FQU82_00909) | - | 949585..951108 (+) | 1524 | WP_000857095.1 | DHA2 family efflux MFS transporter permease subunit | - |
| FQU82_RS04705 (FQU82_00910) | ggt | 951412..953397 (+) | 1986 | WP_001042928.1 | gamma-glutamyltransferase | - |
| FQU82_RS04715 (FQU82_00912) | - | 954098..955327 (+) | 1230 | WP_002134292.1 | tyrosine-type recombinase/integrase | - |
| FQU82_RS04720 (FQU82_00913) | - | 955477..956103 (+) | 627 | WP_000151565.1 | hypothetical protein | - |
| FQU82_RS04725 (FQU82_00914) | - | 956231..956446 (+) | 216 | WP_000153154.1 | hypothetical protein | - |
| FQU82_RS04730 (FQU82_00915) | - | 956449..956658 (+) | 210 | WP_001016479.1 | helix-turn-helix domain-containing protein | - |
| FQU82_RS04735 (FQU82_00916) | - | 956655..957209 (+) | 555 | WP_000991775.1 | BRO-N domain-containing protein | - |
| FQU82_RS04740 (FQU82_00917) | - | 957202..957570 (+) | 369 | WP_001046480.1 | hypothetical protein | - |
| FQU82_RS04745 (FQU82_00918) | - | 957580..957891 (+) | 312 | WP_000787400.1 | hypothetical protein | - |
| FQU82_RS04750 (FQU82_00920) | - | 958006..958284 (+) | 279 | WP_001064706.1 | hypothetical protein | - |
| FQU82_RS04755 (FQU82_00921) | - | 958296..960761 (+) | 2466 | WP_001022433.1 | DUF927 domain-containing protein | - |
| FQU82_RS04760 (FQU82_00922) | - | 961085..961288 (+) | 204 | WP_001984265.1 | single-stranded DNA-binding protein | - |
| FQU82_RS04765 (FQU82_00923) | - | 961425..962867 (+) | 1443 | WP_000003532.1 | hypothetical protein | - |
| FQU82_RS04770 (FQU82_00924) | - | 963210..963884 (+) | 675 | WP_000560650.1 | DUF3800 domain-containing protein | - |
| FQU82_RS04775 (FQU82_00925) | - | 963884..964072 (+) | 189 | WP_000642900.1 | hypothetical protein | - |
| FQU82_RS04780 (FQU82_00927) | - | 964217..964792 (+) | 576 | WP_000067109.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 372 a.a. Molecular weight: 41905.11 Da Isoelectric Point: 6.6944
>NTDB_id=391990 FQU82_RS04635 WP_000347036.1 934379..935497(-) (pilU) [Acinetobacter baumannii strain ATCC 19606]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRKEFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRKEFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ
Nucleotide
Download Length: 1119 bp
>NTDB_id=391990 FQU82_RS04635 WP_000347036.1 934379..935497(-) (pilU) [Acinetobacter baumannii strain ATCC 19606]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAATAGTCTTTCAGGCGAAGTAATTGGTCAACTATTACATTCCA
TCATGAGTGAAAAACAACGCAAAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTCGTAGGCGCGACAG
GTACAGGTAAATCCACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCCAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCTGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAATAGTCTTTCAGGCGAAGTAATTGGTCAACTATTACATTCCA
TCATGAGTGAAAAACAACGCAAAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTCGTAGGCGCGACAG
GTACAGGTAAATCCACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCCAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCTGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Acinetobacter baylyi ADP1 |
75.926 |
100 |
0.772 |
| pilU | Pseudomonas stutzeri DSM 10701 |
69.293 |
98.925 |
0.685 |
| pilU | Vibrio cholerae strain A1552 |
53.243 |
99.462 |
0.53 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
42.197 |
93.011 |
0.392 |