Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | GBN68_RS14875 | Genome accession | NZ_CP045101 |
| Coordinates | 3043443..3043961 (-) | Length | 172 a.a. |
| NCBI ID | WP_114836316.1 | Uniprot ID | - |
| Organism | Acinetobacter johnsonii strain AJ210 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3038443..3048961
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBN68_RS14865 (GBN68_14880) | - | 3041685..3042491 (-) | 807 | WP_234954410.1 | PilX N-terminal domain-containing pilus assembly protein | - |
| GBN68_RS14870 (GBN68_14885) | - | 3042484..3043443 (-) | 960 | WP_234954412.1 | PilW family protein | - |
| GBN68_RS14875 (GBN68_14890) | pilV | 3043443..3043961 (-) | 519 | WP_114836316.1 | type IV pilus modification protein PilV | Machinery gene |
| GBN68_RS14880 (GBN68_14895) | - | 3043961..3044512 (-) | 552 | WP_234954414.1 | Tfp pilus assembly protein FimT/FimU | - |
| GBN68_RS14885 (GBN68_14900) | ispH | 3044678..3045628 (-) | 951 | WP_004978047.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| GBN68_RS14890 (GBN68_14905) | gmk | 3045763..3046386 (+) | 624 | WP_005401338.1 | guanylate kinase | - |
| GBN68_RS14895 (GBN68_14910) | rpoZ | 3046464..3046745 (+) | 282 | WP_004978050.1 | DNA-directed RNA polymerase subunit omega | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 18168.80 Da Isoelectric Point: 6.8575
>NTDB_id=391924 GBN68_RS14875 WP_114836316.1 3043443..3043961(-) (pilV) [Acinetobacter johnsonii strain AJ210]
MKNYNQQGIGLMEVLVALLLLSIGVLGYTALQVRAVEASTEAAQRSHAIFVLKGLAESIRANNTGRASYMALVNQAIPNT
ISTACINPTTAGCDAAALATNDVQQAQANARNFGMRLRMENCPGTAGVAVADRRNCLFAGWGETDISQNTTQCMSAAGVY
VVGSNCLMMEVY
MKNYNQQGIGLMEVLVALLLLSIGVLGYTALQVRAVEASTEAAQRSHAIFVLKGLAESIRANNTGRASYMALVNQAIPNT
ISTACINPTTAGCDAAALATNDVQQAQANARNFGMRLRMENCPGTAGVAVADRRNCLFAGWGETDISQNTTQCMSAAGVY
VVGSNCLMMEVY
Nucleotide
Download Length: 519 bp
>NTDB_id=391924 GBN68_RS14875 WP_114836316.1 3043443..3043961(-) (pilV) [Acinetobacter johnsonii strain AJ210]
ATGAAAAATTATAATCAACAAGGCATTGGACTTATGGAAGTTCTAGTGGCTTTGCTATTACTGTCGATAGGTGTGTTGGG
ATATACAGCACTGCAAGTCAGAGCTGTTGAAGCCTCTACAGAAGCAGCACAGAGATCTCACGCAATATTTGTATTAAAAG
GTTTAGCAGAAAGTATTAGGGCCAATAATACGGGCAGAGCTTCGTATATGGCTTTGGTGAATCAAGCTATACCAAACACG
ATTTCTACAGCATGTATAAATCCAACAACTGCGGGATGTGATGCCGCGGCATTAGCGACAAATGATGTGCAGCAAGCTCA
AGCAAATGCACGTAATTTTGGTATGCGTTTACGAATGGAAAATTGCCCAGGAACTGCAGGTGTTGCAGTGGCAGATCGTA
GAAACTGCCTTTTTGCGGGATGGGGGGAGACTGACATCAGTCAAAATACAACTCAGTGTATGAGTGCGGCTGGTGTTTAT
GTGGTTGGATCTAATTGTTTGATGATGGAGGTTTATTAA
ATGAAAAATTATAATCAACAAGGCATTGGACTTATGGAAGTTCTAGTGGCTTTGCTATTACTGTCGATAGGTGTGTTGGG
ATATACAGCACTGCAAGTCAGAGCTGTTGAAGCCTCTACAGAAGCAGCACAGAGATCTCACGCAATATTTGTATTAAAAG
GTTTAGCAGAAAGTATTAGGGCCAATAATACGGGCAGAGCTTCGTATATGGCTTTGGTGAATCAAGCTATACCAAACACG
ATTTCTACAGCATGTATAAATCCAACAACTGCGGGATGTGATGCCGCGGCATTAGCGACAAATGATGTGCAGCAAGCTCA
AGCAAATGCACGTAATTTTGGTATGCGTTTACGAATGGAAAATTGCCCAGGAACTGCAGGTGTTGCAGTGGCAGATCGTA
GAAACTGCCTTTTTGCGGGATGGGGGGAGACTGACATCAGTCAAAATACAACTCAGTGTATGAGTGCGGCTGGTGTTTAT
GTGGTTGGATCTAATTGTTTGATGATGGAGGTTTATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baumannii D1279779 |
46.277 |
100 |
0.506 |