Detailed information NTG0391876

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: HNO12_RS13820
• Genome accession: NZ_CP053376
• Coordinates: 2881912..2882916 (-)
• Length: 334 a.a.
• NCBI ID: WP_003152385.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain WF02
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2876912..2887916

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HNO12_RS13795 (HNO12_13840)	-	2877875..2878507 (+)	633	WP_003152390.1	GNAT family N-acetyltransferase	-
HNO12_RS13800 (HNO12_13845)	-	2878532..2879176 (+)	645	WP_003152389.1	acetoin utilization AcuB family protein	-
HNO12_RS13805 (HNO12_13850)	-	2879173..2880339 (+)	1167	WP_014305595.1	acetoin utilization protein AcuC	-
HNO12_RS13810 (HNO12_13855)	motS	2880349..2881038 (-)	690	WP_003152387.1	flagellar motor protein MotS	-
HNO12_RS13815 (HNO12_13860)	motP	2881028..2881843 (-)	816	WP_003152386.1	flagellar motor protein MotP	-
HNO12_RS13820 (HNO12_13865)	ccpA	2881912..2882916 (-)	1005	WP_003152385.1	catabolite control protein A	Regulator
HNO12_RS13825 (HNO12_13870)	-	2883196..2884272 (-)	1077	WP_003152383.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
HNO12_RS13830 (HNO12_13875)	ytxJ	2884508..2884834 (-)	327	WP_003152382.1	bacillithiol system redox-active protein YtxJ	-
HNO12_RS13835 (HNO12_13880)	-	2884860..2885273 (-)	414	WP_003152380.1	YtxH domain-containing protein	-
HNO12_RS13840 (HNO12_13885)	-	2885306..2885728 (-)	423	WP_003152378.1	DUF948 domain-containing protein	-
HNO12_RS13845 (HNO12_13890)	murC	2885884..2887182 (-)	1299	WP_003152377.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36963.29 Da
• Isoelectric Point: 4.9206

>NTDB_id=391876 HNO12_RS13820 WP_003152385.1 2881912..2882916(-) (ccpA) [Bacillus amyloliquefaciens strain WF02]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNLEKELHLLNTMLGKQVDGIVFMGGNITDEHVEEFKRSPVPIVLAASVEEQGETPSVAI
DYEQAIYDAVKLFIDKGHRDIAFVSGPMQEPINRSKKLQGYKRALEEAAIPFNEQFVAEGDYTYDSGMEALQSLMGLDRK
PTAILSATDEMALGIIHAAQDQGLSIPDDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRQSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=391876 HNO12_RS13820 WP_003152385.1 2881912..2882916(-) (ccpA) [Bacillus amyloliquefaciens strain WF02]
GTGAGCAACATTACGATATACGATGTGGCCAGAGAAGCAAATGTCAGTATGGCGACTGTTTCCCGCGTCGTGAACGGCAA
CCCGAATGTAAAACCGACGACCAGAAAAAAAGTATTGGAAGCCATTGACCGGCTCGGCTACCGCCCGAACGCGGTGGCAA
GAGGGCTTGCAAGCAAAAAAACGACAACGGTCGGCGTCATCATCCCTGATATCTCAAGCATTTTCTACTCGGAACTTGCG
CGTGGAATTGAAGATATCGCGACGATGTACAAATATAATATTATCTTAAGCAACTCGGATCAAAATCTTGAGAAAGAACT
GCATCTGTTAAATACGATGCTCGGCAAACAAGTGGACGGTATCGTATTTATGGGCGGCAACATTACGGACGAGCATGTCG
AAGAATTTAAGCGCTCTCCTGTGCCGATCGTCTTGGCTGCATCAGTGGAAGAACAGGGCGAGACGCCTTCTGTCGCCATT
GATTATGAACAGGCGATTTATGATGCCGTTAAGCTTTTCATTGATAAAGGGCATCGCGATATTGCATTCGTCTCCGGACC
GATGCAAGAGCCGATCAACCGTTCGAAAAAACTGCAAGGGTACAAACGGGCGCTTGAAGAAGCGGCGATTCCGTTTAACG
AGCAATTCGTAGCGGAAGGCGATTACACTTATGATTCCGGTATGGAGGCGCTTCAAAGCTTGATGGGCCTTGACCGGAAA
CCGACGGCGATTCTTTCTGCGACGGATGAAATGGCCCTCGGCATTATCCATGCGGCCCAAGATCAAGGTCTTTCGATACC
TGATGATCTTGATATTATCGGTTTTGACAATACGAGATTGAGCCTGATGGTCCGCCCTCAGCTTTCAACAGTCGTGCAGC
CTACGTACGATATCGGCGCCGTGGCGATGAGACTTTTGACAAAACTGATGAACAAAGAGCCGGTTGAAGAGCATATCGTC
GAATTGCCTCACCGCATCGAATTAAGACAATCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.242	98.802	0.536
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.333	98.802	0.527
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503