Detailed information NTG0391866

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: F9230_RS10080
• Genome accession: NZ_CP045099
• Coordinates: 2081449..2082069 (-)
• Length: 206 a.a.
• NCBI ID: WP_234950253.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain AJ14
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2076449..2087069

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F9230_RS10050 (F9230_10040)	-	2076815..2077246 (-)	432	WP_234950249.1	SRPBCC family protein	-
F9230_RS10055 (F9230_10045)	tadA	2077322..2077822 (-)	501	WP_234950250.1	tRNA adenosine(34) deaminase TadA	-
F9230_RS10060 (F9230_10050)	-	2077828..2078949 (-)	1122	WP_234950251.1	enoyl-CoA hydratase/isomerase family protein	-
F9230_RS10065 (F9230_10055)	ung	2078946..2079659 (-)	714	WP_004696856.1	uracil-DNA glycosylase	-
F9230_RS10070 (F9230_10060)	-	2079701..2080297 (-)	597	WP_004984830.1	6-pyruvoyl trahydropterin synthase family protein	-
F9230_RS10075 (F9230_10065)	gspK	2080420..2081370 (-)	951	WP_234950252.1	type II secretion system minor pseudopilin GspK	-
F9230_RS10080 (F9230_10070)	xcpW	2081449..2082069 (-)	621	WP_234950253.1	type II secretion system minor pseudopilin GspJ	Machinery gene
F9230_RS10085 (F9230_10075)	xcpV	2082066..2082467 (-)	402	WP_234950254.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
F9230_RS10090 (F9230_10080)	-	2082502..2083071 (-)	570	WP_234950256.1	type II secretion system protein	-
F9230_RS10095 (F9230_10085)	-	2083084..2083698 (-)	615	WP_004696845.1	TetR/AcrR family transcriptional regulator	-
F9230_RS10100 (F9230_10090)	-	2083744..2084517 (-)	774	WP_234950257.1	TatD family hydrolase	-
F9230_RS10105 (F9230_10095)	-	2084544..2084885 (-)	342	WP_058869739.1	PilZ domain-containing protein	-
F9230_RS10110 (F9230_10100)	-	2084900..2085883 (-)	984	WP_148825944.1	DNA polymerase III subunit delta' C-terminal domain-containing protein	-
F9230_RS10115 (F9230_10105)	kdsB	2085903..2086664 (-)	762	WP_205666743.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 206 a.a.
• Molecular weight: 23577.14 Da
• Isoelectric Point: 5.3491

>NTDB_id=391866 F9230_RS10080 WP_234950253.1 2081449..2082069(-) (xcpW) [Acinetobacter johnsonii strain AJ14]
MTKRSGFTLVELLVAIAIFAVLSALGWKVFDYLIKIKERNTQHEQRLGQLQEAYQQVLRDTVQIVPITANVAGQIQPAVM
LQNGQLTFSKTGVTDPLMQGIPPEERVEYIYKADEKKLYRYKYKNLNQTGNDQPETSVLLDSVDQFQIMLLNPNEMAQWP
EVALSENDVTQAKILPRGLKINLTVNEVSYEWVFSLLNTDFLKQKN

Nucleotide

• Length: 621 bp

>NTDB_id=391866 F9230_RS10080 WP_234950253.1 2081449..2082069(-) (xcpW) [Acinetobacter johnsonii strain AJ14]
ATGACAAAACGCTCAGGCTTTACTTTGGTTGAGTTATTGGTGGCAATCGCGATTTTTGCTGTCCTTTCAGCTTTGGGTTG
GAAGGTTTTTGATTATCTGATCAAGATTAAAGAGCGTAATACCCAACATGAACAGCGCTTAGGTCAACTACAAGAAGCAT
ATCAACAAGTGTTACGTGACACGGTGCAAATTGTACCAATTACTGCCAATGTTGCGGGACAGATTCAACCCGCAGTCATG
TTGCAAAATGGTCAGTTAACCTTTAGTAAAACTGGCGTGACTGATCCTTTAATGCAAGGCATACCGCCTGAAGAGCGAGT
TGAATATATTTATAAAGCAGATGAAAAAAAACTGTACCGTTATAAATATAAAAATTTAAATCAAACAGGTAATGATCAAC
CTGAAACCAGTGTTTTACTTGATTCAGTTGATCAATTTCAAATTATGTTACTTAACCCCAATGAAATGGCACAATGGCCT
GAGGTGGCATTGAGTGAAAATGATGTGACTCAGGCAAAAATACTACCGCGCGGTTTAAAAATAAACCTCACCGTCAATGA
AGTGAGTTATGAATGGGTGTTTAGTTTATTAAATACAGACTTTTTAAAACAAAAAAATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

• Type II secretion system (T2SS), protein J (T2SSJ) (59-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	58.706	97.573	0.573