Detailed information NTG0391803

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: GAS19_RS02020
• Genome accession: NZ_CP045087
• Coordinates: 418778..419947 (-)
• Length: 389 a.a.
• NCBI ID: WP_153477223.1
• Uniprot ID: -
• Organism: Burkholderia glumae strain GX
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 413778..424947

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GAS19_RS02000 (GAS19_02045)	-	413976..414545 (+)	570	WP_015877061.1	acyloxyacyl hydrolase	-
GAS19_RS02005 (GAS19_02050)	-	414585..414971 (+)	387	WP_015877060.1	nuclear transport factor 2 family protein	-
GAS19_RS02010 (GAS19_02055)	leuA	415168..416817 (-)	1650	WP_015877059.1	2-isopropylmalate synthase	-
GAS19_RS02015 (GAS19_02065)	ybiB	417231..418208 (-)	978	WP_015877058.1	DNA-binding protein YbiB	-
GAS19_RS02020 (GAS19_02070)	pilA	418778..419947 (-)	1170	WP_153477223.1	signal recognition particle-docking protein FtsY	Machinery gene
GAS19_RS02025 (GAS19_02075)	rsmD	420135..420749 (+)	615	WP_035983602.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
GAS19_RS02030 (GAS19_02080)	coaD	420860..421360 (+)	501	WP_015877055.1	pantetheine-phosphate adenylyltransferase	-
GAS19_RS02035 (GAS19_02085)	-	421505..422827 (-)	1323	WP_015877054.1	TIGR00366 family protein	-
GAS19_RS02040 (GAS19_02090)	-	423117..423386 (+)	270	WP_015877053.1	YfhL family 4Fe-4S dicluster ferredoxin	-
GAS19_RS02045 (GAS19_02095)	hisC	423450..424517 (-)	1068	WP_035983605.1	histidinol-phosphate transaminase	-

Sequence

Protein

• Length: 389 a.a.
• Molecular weight: 40638.61 Da
• Isoelectric Point: 5.4803

>NTDB_id=391803 GAS19_RS02020 WP_153477223.1 418778..419947(-) (pilA) [Burkholderia glumae strain GX]
MFSFFKRLIGSKADDASQDAPAADEQASAAHAPDAAGHAAAAASRLAPAPAHDAEPAASPAAPVPAAPAPAAVPAAPAVE
VVPPPAPEPAAKKSWIARLRSGLSKTSTSLTNVFVNTRIDDELYEELEAALLMSDAGIDATEYLLGALREKVRAERLSDP
LQVKAALRALLVDLLAPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQRFDQSVLLAAGDTFRAAAREQLAIWG
ERNNVTVVQQESGDPAAVIFDAVGAARARKIDVVMADTAGRLPTQLHLMEELRKVKRVIGKAQSDAPHEVLLVIDANTGQ
NALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPIPVYFIGVGEKVEDLQPFNAEEFADALLG

Nucleotide

• Length: 1170 bp

>NTDB_id=391803 GAS19_RS02020 WP_153477223.1 418778..419947(-) (pilA) [Burkholderia glumae strain GX]
ATGTTCAGCTTCTTCAAACGATTGATCGGCTCGAAGGCCGACGACGCGTCGCAGGACGCGCCGGCGGCCGACGAGCAAGC
CAGCGCGGCTCACGCGCCGGACGCGGCCGGGCATGCCGCCGCCGCGGCGAGCCGGCTGGCGCCCGCGCCGGCACACGACG
CCGAACCCGCCGCCAGCCCGGCTGCACCGGTGCCGGCCGCCCCCGCCCCTGCGGCCGTGCCCGCCGCCCCCGCCGTCGAA
GTCGTGCCGCCGCCCGCGCCTGAGCCGGCCGCGAAAAAATCCTGGATCGCACGACTACGCTCCGGGCTCTCGAAGACGAG
CACGAGCCTCACCAACGTGTTCGTCAATACCAGGATCGACGACGAACTCTACGAGGAGCTCGAAGCCGCGCTGCTGATGT
CCGATGCCGGCATCGACGCGACCGAATACCTGCTCGGCGCGCTGCGCGAGAAGGTGCGCGCCGAACGCCTGAGCGATCCG
CTGCAGGTGAAGGCCGCGCTGCGCGCGCTGCTCGTCGACCTGCTCGCGCCGCTCGAGAAATCGCTGATGCTGGGCCGCGC
CCAGCCGCTCGTGATGATGATCGCGGGCGTCAACGGAGCCGGCAAGACCACCAGCATCGGTAAGCTCGCCAAACACCTGC
AGCGCTTCGACCAATCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAGCAGCTCGCGATCTGGGGC
GAGCGCAACAACGTGACCGTGGTGCAGCAGGAAAGCGGCGATCCGGCCGCCGTGATATTCGATGCGGTCGGCGCCGCGCG
CGCGCGCAAGATCGACGTGGTGATGGCCGACACCGCGGGCCGGTTGCCCACGCAGTTGCACCTGATGGAGGAACTGCGCA
AGGTCAAGCGCGTGATCGGCAAGGCGCAGAGCGACGCGCCGCACGAGGTGCTGCTCGTGATCGACGCCAATACCGGCCAG
AACGCGCTCGCCCAGGTGAAGGCATTCGACGACGCGCTGGGCCTGACCGGGCTCATCGTCACCAAGCTCGACGGCACCGC
GAAGGGCGGCATTCTCGCCGCGATCGCGCGGCAGCGGCCGATACCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGG
ACTTGCAGCCGTTCAACGCCGAGGAATTCGCCGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (108-168)

• SRP54-type protein, GTPase domain (SRP54) (190-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.3	100	0.558