Detailed information NTG0391795

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: GAN21_RS10335
• Genome accession: NZ_CP045086
• Coordinates: 2166013..2166987 (+)
• Length: 324 a.a.
• NCBI ID: WP_014613820.1
• Uniprot ID: -
• Organism: Staphylococcus pseudintermedius strain KCTC 43136
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2161013..2171987

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GAN21_RS10300	rpmG	2161412..2161561 (+)	150	WP_014613813.1	50S ribosomal protein L33	-
GAN21_RS10305	-	2161713..2162252 (+)	540	WP_014613814.1	5-formyltetrahydrofolate cyclo-ligase	-
GAN21_RS10310	-	2162271..2163710 (+)	1440	WP_110161176.1	rhomboid family intramembrane serine protease	-
GAN21_RS10315	-	2163712..2163915 (+)	204	WP_014613816.1	YqgQ family protein	-
GAN21_RS10320	-	2163912..2164898 (+)	987	WP_014613817.1	ROK family glucokinase	-
GAN21_RS10325	-	2164899..2165210 (+)	312	WP_014613818.1	MTH1187 family thiamine-binding protein	-
GAN21_RS10330	-	2165223..2165852 (+)	630	WP_037542865.1	MBL fold metallo-hydrolase	-
GAN21_RS10335	comGA	2166013..2166987 (+)	975	WP_014613820.1	competence type IV pilus ATPase ComGA	Machinery gene
GAN21_RS10340	comGB	2166956..2168023 (+)	1068	WP_037542939.1	competence type IV pilus assembly protein ComGB	-
GAN21_RS10345	comGC	2168036..2168359 (+)	324	WP_015729165.1	competence type IV pilus major pilin ComGC	Machinery gene
GAN21_RS10350	comGD	2168337..2168777 (+)	441	WP_014613823.1	competence type IV pilus minor pilin ComGD	-
GAN21_RS12825	-	2168882..2169082 (+)	201	WP_020219623.1	hypothetical protein	-
GAN21_RS10360	-	2168988..2169473 (+)	486	WP_081378286.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
GAN21_RS10365	-	2169637..2170164 (+)	528	WP_014613826.1	shikimate kinase	-
GAN21_RS10370	gcvT	2170322..2171413 (+)	1092	WP_110160319.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 36846.58 Da
• Isoelectric Point: 7.5584

>NTDB_id=391795 GAN21_RS10335 WP_014613820.1 2166013..2166987(+) (comGA) [Staphylococcus pseudintermedius strain KCTC 43136]
MQLLLDHVIQFALQNEASDIHFIPSQSQVEVKLRVKDQLVLYDTLNLETYQKLLTLLKYQAGLDISTRHKAQSGRYIYEH
KALYYLRVSTLPLNLGTESCVIRITPQYFQNAKAHSVLDIKSNMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDSHIARDVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGLSHQDLSQSINLIINQRLITTKNDQRQLVYETMDQQEIHYFLNNNFQLPTAFTSLSHKLQLLNKEGVIDEKILR
KYTI

Nucleotide

• Length: 975 bp

>NTDB_id=391795 GAN21_RS10335 WP_014613820.1 2166013..2166987(+) (comGA) [Staphylococcus pseudintermedius strain KCTC 43136]
ATGCAACTACTATTAGATCATGTAATACAATTTGCACTTCAAAATGAGGCATCAGACATTCATTTTATCCCATCACAATC
ACAAGTCGAAGTGAAACTCAGAGTGAAAGATCAACTTGTATTATATGACACATTAAATCTAGAAACGTATCAAAAATTGT
TAACTTTGTTGAAATACCAAGCTGGATTAGATATTTCGACACGCCACAAAGCGCAAAGTGGGCGCTATATTTATGAACAT
AAAGCGTTATATTATTTAAGAGTGTCCACGTTACCTTTAAACTTAGGTACTGAAAGTTGTGTTATTCGTATTACACCCCA
ATATTTTCAAAATGCGAAAGCTCATAGTGTATTAGACATCAAATCTAATATGGAGAAAAAGCAAGGTTTAATTCTGTTTA
GCGGGCCTACAGGTGCAGGAAAGAGCACGTTAATGTATCAAATGGTCGTCTATGCTAAACAAAAGTTAAACCTGAATATT
ATCACAATAGAAGACCCGGTCGAGCAGCTTGTGAACGGCATTACGCAAATTTCCGTTAACGAAAAAGCTGATATTACGTA
TGGATCGTCGTTAAAAGCAATTCTTCGTTGTGATCCAGATGTCATCTTAATTGGTGAGATTCGTGACAGTCATATTGCAA
GGGACGTTATACAAGCGAGTTTAAGTGGGCATTTAGTATTGTCGACGATACACGCCAATGATTGTCAAGGGGTGCTCCTT
AGACTGATTGAAATGGGACTCTCTCACCAAGATTTATCTCAATCTATCAATCTCATCATCAATCAAAGACTCATTACAAC
AAAAAACGACCAGCGACAACTCGTCTATGAAACGATGGATCAACAGGAGATTCATTACTTTTTGAATAATAACTTCCAAC
TACCTACTGCTTTCACAAGCCTTTCTCATAAGCTTCAACTTCTGAATAAAGAGGGGGTTATAGATGAAAAGATTTTACGA
AAGTATACGATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (9-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	58.514	99.691	0.583
comGA	Staphylococcus aureus N315	58.514	99.691	0.583