Detailed information NTG0391742

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: GAN20_RS01410
• Genome accession: NZ_CP045085
• Coordinates: 298990..299964 (-)
• Length: 324 a.a.
• NCBI ID: WP_014613820.1
• Uniprot ID: -
• Organism: Staphylococcus pseudintermedius strain KCTC 43135
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 293990..304964

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GAN20_RS01375	gcvT	294564..295655 (-)	1092	WP_110160319.1	glycine cleavage system aminomethyltransferase GcvT	-
GAN20_RS01380	-	295813..296340 (-)	528	WP_014613826.1	shikimate kinase	-
GAN20_RS01385	-	296504..296989 (-)	486	WP_081378286.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
GAN20_RS01390	-	296895..297095 (-)	201	WP_020219623.1	hypothetical protein	-
GAN20_RS01395	comGD	297200..297640 (-)	441	WP_014613823.1	competence type IV pilus minor pilin ComGD	-
GAN20_RS01400	comGC	297618..297941 (-)	324	WP_015729165.1	competence type IV pilus major pilin ComGC	Machinery gene
GAN20_RS01405	comGB	297954..299021 (-)	1068	WP_037542939.1	competence type IV pilus assembly protein ComGB	-
GAN20_RS01410	comGA	298990..299964 (-)	975	WP_014613820.1	competence type IV pilus ATPase ComGA	Machinery gene
GAN20_RS01415	-	300125..300754 (-)	630	WP_037542865.1	MBL fold metallo-hydrolase	-
GAN20_RS01420	-	300767..301078 (-)	312	WP_014613818.1	MTH1187 family thiamine-binding protein	-
GAN20_RS01425	-	301079..302065 (-)	987	WP_014613817.1	ROK family glucokinase	-
GAN20_RS01430	-	302062..302265 (-)	204	WP_014613816.1	YqgQ family protein	-
GAN20_RS01435	-	302267..303706 (-)	1440	WP_110161176.1	rhomboid family intramembrane serine protease	-
GAN20_RS01440	-	303725..304264 (-)	540	WP_014613814.1	5-formyltetrahydrofolate cyclo-ligase	-
GAN20_RS01445	rpmG	304416..304565 (-)	150	WP_014613813.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 36846.58 Da
• Isoelectric Point: 7.5584

>NTDB_id=391742 GAN20_RS01410 WP_014613820.1 298990..299964(-) (comGA) [Staphylococcus pseudintermedius strain KCTC 43135]
MQLLLDHVIQFALQNEASDIHFIPSQSQVEVKLRVKDQLVLYDTLNLETYQKLLTLLKYQAGLDISTRHKAQSGRYIYEH
KALYYLRVSTLPLNLGTESCVIRITPQYFQNAKAHSVLDIKSNMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDSHIARDVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGLSHQDLSQSINLIINQRLITTKNDQRQLVYETMDQQEIHYFLNNNFQLPTAFTSLSHKLQLLNKEGVIDEKILR
KYTI

Nucleotide

• Length: 975 bp

>NTDB_id=391742 GAN20_RS01410 WP_014613820.1 298990..299964(-) (comGA) [Staphylococcus pseudintermedius strain KCTC 43135]
ATGCAACTACTATTAGATCATGTAATACAATTTGCACTTCAAAATGAGGCATCAGACATTCATTTTATCCCATCACAATC
ACAAGTCGAAGTGAAACTCAGAGTGAAAGATCAACTTGTATTATATGACACATTAAATCTAGAAACGTATCAAAAATTGT
TAACTTTGTTGAAATACCAAGCTGGATTAGATATTTCGACACGCCACAAAGCGCAAAGTGGGCGCTATATTTATGAACAT
AAAGCGTTATATTATTTAAGAGTGTCCACGTTACCTTTAAACTTAGGTACTGAAAGTTGTGTTATTCGTATTACACCCCA
ATATTTTCAAAATGCGAAAGCTCATAGTGTATTAGACATCAAATCTAATATGGAGAAAAAGCAAGGTTTAATTCTGTTTA
GCGGGCCTACAGGTGCAGGAAAGAGCACGTTAATGTATCAAATGGTCGTCTATGCTAAACAAAAGTTAAACCTGAATATT
ATCACAATAGAAGACCCGGTCGAGCAGCTTGTGAACGGCATTACGCAAATTTCCGTTAACGAAAAAGCTGATATTACGTA
TGGATCGTCGTTAAAAGCAATTCTTCGTTGTGATCCAGATGTCATCTTAATTGGTGAGATTCGTGACAGTCATATTGCAA
GGGACGTTATACAAGCGAGTTTAAGTGGGCATTTAGTATTGTCGACGATACACGCCAATGATTGTCAAGGGGTGCTCCTT
AGACTGATTGAAATGGGACTCTCTCACCAAGATTTATCTCAATCTATCAATCTCATCATCAATCAAAGACTCATTACAAC
AAAAAACGACCAGCGACAACTCGTCTATGAAACGATGGATCAACAGGAGATTCATTACTTTTTGAATAATAACTTCCAAC
TACCTACTGCTTTCACAAGCCTTTCTCATAAGCTTCAACTTCTGAATAAAGAGGGGGTTATAGATGAAAAGATTTTACGA
AAGTATACGATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (9-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	58.514	99.691	0.583
comGA	Staphylococcus aureus N315	58.514	99.691	0.583