Detailed information NTG0391728

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: GAN19_RS11275
• Genome accession: NZ_CP045084
• Coordinates: 2368747..2369721 (-)
• Length: 324 a.a.
• NCBI ID: WP_014613820.1
• Uniprot ID: -
• Organism: Staphylococcus pseudintermedius strain KCTC 43134
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2363747..2374721

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GAN19_RS11240	gcvT	2364321..2365412 (-)	1092	WP_110160319.1	glycine cleavage system aminomethyltransferase GcvT	-
GAN19_RS11245	-	2365570..2366097 (-)	528	WP_014613826.1	shikimate kinase	-
GAN19_RS11250	-	2366261..2366626 (-)	366	WP_037544219.1	ComGF family competence protein	-
GAN19_RS11255	-	2366652..2366885 (-)	234	WP_014613824.1	hypothetical protein	-
GAN19_RS11260	comGD	2366957..2367418 (-)	462	WP_234984582.1	competence type IV pilus minor pilin ComGD	-
GAN19_RS11265	comGC	2367375..2367698 (-)	324	WP_015729165.1	competence type IV pilus major pilin ComGC	Machinery gene
GAN19_RS11270	comGB	2367711..2368778 (-)	1068	WP_037542939.1	competence type IV pilus assembly protein ComGB	-
GAN19_RS11275	comGA	2368747..2369721 (-)	975	WP_014613820.1	competence type IV pilus ATPase ComGA	Machinery gene
GAN19_RS11280	-	2369882..2370511 (-)	630	WP_037542865.1	MBL fold metallo-hydrolase	-
GAN19_RS11285	-	2370524..2370835 (-)	312	WP_014613818.1	MTH1187 family thiamine-binding protein	-
GAN19_RS11290	-	2370836..2371822 (-)	987	WP_014613817.1	ROK family glucokinase	-
GAN19_RS11295	-	2371819..2372022 (-)	204	WP_014613816.1	YqgQ family protein	-
GAN19_RS11300	-	2372024..2373463 (-)	1440	WP_110161176.1	rhomboid family intramembrane serine protease	-
GAN19_RS11305	-	2373482..2374021 (-)	540	WP_014613814.1	5-formyltetrahydrofolate cyclo-ligase	-
GAN19_RS11310	rpmG	2374173..2374337 (-)	165	WP_256726578.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 36846.58 Da
• Isoelectric Point: 7.5584

>NTDB_id=391728 GAN19_RS11275 WP_014613820.1 2368747..2369721(-) (comGA) [Staphylococcus pseudintermedius strain KCTC 43134]
MQLLLDHVIQFALQNEASDIHFIPSQSQVEVKLRVKDQLVLYDTLNLETYQKLLTLLKYQAGLDISTRHKAQSGRYIYEH
KALYYLRVSTLPLNLGTESCVIRITPQYFQNAKAHSVLDIKSNMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDSHIARDVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGLSHQDLSQSINLIINQRLITTKNDQRQLVYETMDQQEIHYFLNNNFQLPTAFTSLSHKLQLLNKEGVIDEKILR
KYTI

Nucleotide

• Length: 975 bp

>NTDB_id=391728 GAN19_RS11275 WP_014613820.1 2368747..2369721(-) (comGA) [Staphylococcus pseudintermedius strain KCTC 43134]
ATGCAACTACTATTAGATCATGTAATACAATTTGCACTTCAAAATGAGGCATCAGACATTCATTTTATCCCATCACAATC
ACAAGTCGAAGTGAAACTCAGAGTGAAAGATCAACTTGTATTATATGACACATTAAATCTAGAAACGTATCAAAAATTGT
TAACTTTGTTGAAATACCAAGCTGGATTAGATATTTCGACACGCCACAAAGCGCAAAGTGGGCGCTATATTTATGAACAT
AAAGCGTTATATTATTTAAGAGTGTCCACGTTACCTTTAAACTTAGGTACTGAAAGTTGTGTTATTCGTATTACACCCCA
ATATTTTCAAAATGCGAAAGCTCATAGTGTATTAGACATCAAATCTAATATGGAGAAAAAGCAAGGTTTAATTCTGTTTA
GCGGGCCTACAGGTGCAGGAAAGAGCACGTTAATGTATCAAATGGTCGTCTATGCTAAACAAAAGTTAAACCTGAATATT
ATCACAATAGAAGACCCGGTCGAGCAGCTTGTGAACGGCATTACGCAAATTTCCGTTAACGAAAAAGCTGATATTACGTA
TGGATCGTCGTTAAAAGCAATTCTTCGTTGTGATCCAGATGTCATCTTAATTGGTGAGATTCGTGACAGTCATATTGCAA
GGGACGTTATACAAGCGAGTTTAAGTGGGCATTTAGTATTGTCGACGATACACGCCAATGATTGTCAAGGGGTGCTCCTT
AGACTGATTGAAATGGGACTCTCTCACCAAGATTTATCTCAATCTATCAATCTCATCATCAATCAAAGACTCATTACAAC
AAAAAACGACCAGCGACAACTCGTCTATGAAACGATGGATCAACAGGAGATTCATTACTTTTTGAATAATAACTTCCAAC
TACCTACTGCTTTCACAAGCCTTTCTCATAAGCTTCAACTTCTGAATAAAGAGGGGGTTATAGATGAAAAGATTTTACGA
AAGTATACGATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (9-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	58.514	99.691	0.583
comGA	Staphylococcus aureus N315	58.514	99.691	0.583