Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   HA034_RS01945 Genome accession   NZ_CP053356
Coordinates   312112..312930 (+) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus strain 14507     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 307112..317930
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HA034_RS01915 (HA034_01915) - 308691..309002 (+) 312 WP_000344116.1 DUF3467 domain-containing protein -
  HA034_RS01920 (HA034_01920) - 308989..309372 (+) 384 WP_001251276.1 hypothetical protein -
  HA034_RS01925 (HA034_01925) - 309469..309549 (-) 81 WP_106875183.1 hypothetical protein -
  HA034_RS01930 (HA034_01930) - 309896..310057 (+) 162 WP_001005407.1 SE1561 family protein -
  HA034_RS01935 (HA034_01935) - 310188..310703 (+) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  HA034_RS01940 (HA034_01940) sgtB 311043..311852 (+) 810 WP_000830384.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  HA034_RS01945 (HA034_01945) recX 312112..312930 (+) 819 WP_001124422.1 recombination regulator RecX Regulator
  HA034_RS01950 (HA034_01950) - 312908..313222 (+) 315 WP_000435806.1 YfhH family protein -
  HA034_RS01955 (HA034_01955) - 313237..314754 (+) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  HA034_RS01960 (HA034_01960) - 314763..315599 (+) 837 WP_000886462.1 membrane protein -
  HA034_RS14585 - 315937..316134 (+) 198 WP_254599531.1 hypothetical protein -
  HA034_RS14590 - 316118..316339 (+) 222 WP_254599532.1 transposase family protein -
  HA034_RS14595 - 316248..316526 (+) 279 WP_254599534.1 hypothetical protein -
  HA034_RS14600 - 316648..316710 (+) 63 WP_254599533.1 hypothetical protein -
  HA034_RS14605 - 316691..317302 (+) 612 Protein_364 transposase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=391685 HA034_RS01945 WP_001124422.1 312112..312930(+) (recX) [Staphylococcus aureus strain 14507]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=391685 HA034_RS01945 WP_001124422.1 312112..312930(+) (recX) [Staphylococcus aureus strain 14507]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATTCAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTTTATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGACCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996

Multiple sequence alignment