Detailed information NTG0391642

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: FG167_RS04545
• Genome accession: NZ_CP045067
• Coordinates: 1032347..1033705 (-)
• Length: 452 a.a.
• NCBI ID: WP_203460238.1
• Uniprot ID: A0A974U2J4
• Organism: Lacinutrix sp. WUR7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1027347..1038705

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FG167_RS04545 (FG167_04515)	radA	1032347..1033705 (-)	1359	WP_203460238.1	DNA repair protein RadA	Machinery gene
FG167_RS04550 (FG167_04520)	-	1033798..1034946 (-)	1149	WP_203460239.1	alpha/beta hydrolase	-
FG167_RS04555 (FG167_04525)	panD	1035074..1035424 (-)	351	WP_203460240.1	aspartate 1-decarboxylase	-
FG167_RS04560 (FG167_04530)	panC	1035600..1036448 (-)	849	WP_203460241.1	pantoate--beta-alanine ligase	-
FG167_RS04565 (FG167_04535)	-	1036645..1037454 (+)	810	WP_203460242.1	glycogen/starch synthase	-

Sequence

Protein

• Length: 452 a.a.
• Molecular weight: 49622.12 Da
• Isoelectric Point: 6.0965

>NTDB_id=391642 FG167_RS04545 WP_203460238.1 1032347..1033705(-) (radA) [Lacinutrix sp. WUR7]
MAKVKTTFFCQNCGSQYAKWQGQCTSCKEWNTIVEEVIQKPEKSDWKTPTSTKKRVSKPLTINAIDASEDARLDTQDGEF
NRVLGGGIVPGSLILLGGEPGIGKSTLLLQIALKLPYKTLYVSGEESQKQIKMRAERIHANNDTCFILTETKTQNIFKQI
EALEPDIVVIDSIQTLHSDYIESSSGSISQIKECTTELIKFAKETATPVLLIGHITKDGNIAGPKILEHMVDTVLQFEGD
RNHLFRILRANKNRFGSTNEIGIYEMQGSGLKEVSNPSEILISKKDEDLSGNAVASTIEGLRPLMIEVQALVSTAVYGTP
QRSATGFNAKRLNMLLAVLEKRAGFLLGAKDVFLNITGGISVDDPAIDLAVVAAILSSNEDEALPKNYCFAAEVGLSGEI
RPVQRVEQRILEAEKLGFSTIFVSKYNKIALKNLTIKIQLISTVEELVAFIL

Nucleotide

• Length: 1359 bp

>NTDB_id=391642 FG167_RS04545 WP_203460238.1 1032347..1033705(-) (radA) [Lacinutrix sp. WUR7]
ATGGCTAAAGTAAAAACAACTTTTTTTTGTCAGAACTGTGGATCGCAATACGCAAAATGGCAAGGACAATGTACTTCTTG
TAAAGAGTGGAACACGATAGTAGAAGAGGTAATTCAAAAACCAGAAAAAAGCGACTGGAAAACACCAACTTCGACAAAAA
AGCGTGTTTCAAAGCCGTTAACTATTAATGCTATAGATGCATCAGAAGATGCAAGGTTAGACACGCAAGATGGCGAGTTT
AATCGCGTGCTTGGTGGCGGAATTGTACCCGGATCTTTAATCCTTTTAGGAGGAGAACCAGGAATAGGTAAAAGTACTTT
ATTGCTTCAAATAGCATTAAAACTGCCATATAAAACCTTATATGTTTCTGGTGAAGAAAGCCAAAAACAAATAAAAATGC
GAGCAGAACGTATACATGCGAATAATGATACCTGCTTTATTCTTACCGAAACAAAAACCCAAAATATCTTTAAGCAAATT
GAAGCGCTAGAGCCCGATATTGTGGTTATAGATTCTATACAAACCTTACATAGTGATTATATAGAATCGTCTAGCGGAAG
TATTTCTCAAATTAAAGAATGTACTACAGAACTCATTAAATTTGCAAAAGAAACAGCAACTCCAGTGCTATTAATTGGTC
ATATTACAAAAGATGGAAACATTGCAGGACCAAAAATATTAGAGCACATGGTAGATACTGTACTTCAGTTTGAAGGAGAT
AGAAACCATCTTTTCAGAATTCTTCGTGCCAATAAAAACCGTTTTGGTTCTACTAATGAAATTGGTATTTATGAAATGCA
AGGTTCTGGTTTAAAAGAAGTTTCTAACCCGAGTGAAATATTAATCTCTAAAAAAGATGAAGACTTGTCTGGTAACGCTG
TTGCTTCTACTATTGAAGGATTAAGACCACTTATGATAGAAGTGCAAGCATTAGTTAGTACCGCAGTTTATGGTACGCCA
CAACGAAGTGCCACCGGATTTAATGCGAAAAGATTAAATATGCTGTTAGCAGTTTTAGAAAAACGAGCTGGTTTTCTCCT
TGGTGCAAAAGATGTATTTTTAAATATTACAGGAGGAATATCTGTAGATGATCCAGCAATAGATTTGGCTGTTGTAGCTG
CAATTTTATCTTCTAATGAAGATGAAGCACTACCAAAAAATTATTGCTTTGCCGCAGAGGTTGGCTTGTCTGGAGAAATT
CGTCCCGTACAACGTGTGGAACAACGTATTCTGGAAGCCGAAAAATTAGGATTTTCTACCATATTTGTGTCTAAATACAA
TAAAATAGCACTTAAAAATCTAACAATAAAAATTCAATTAATATCTACGGTTGAGGAATTGGTAGCATTTATCCTATAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (68-219)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (9-35)

• Subunit ChlI of Mg-chelatase (ChlI) (330-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Streptococcus pneumoniae R6	48.673	100	0.487
radA	Streptococcus pneumoniae Rx1	48.673	100	0.487
radA	Streptococcus pneumoniae D39	48.673	100	0.487
radA	Streptococcus pneumoniae TIGR4	48.673	100	0.487
radA	Bacillus subtilis subsp. subtilis str. 168	50.93	95.133	0.485
radA	Streptococcus mitis SK321	48.451	100	0.485
radA	Streptococcus mitis NCTC 12261	49.883	94.469	0.471