Detailed information NTG0391502

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HLK60_RS00865
• Genome accession: NZ_CP053296
• Coordinates: 192067..193050 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain M1/5
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 187067..198050

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HLK60_RS00850 (HLK60_00850)	dppA	188211..189818 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
HLK60_RS00855 (HLK60_00855)	dppB	190125..191144 (+)	1020	WP_001540029.1	dipeptide ABC transporter permease DppB	-
HLK60_RS00860 (HLK60_00860)	dppC	191154..192056 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HLK60_RS00865 (HLK60_00865)	amiE	192067..193050 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
HLK60_RS00870 (HLK60_00870)	dppF	193047..194051 (+)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HLK60_RS00875 (HLK60_00875)	yhjV	194081..195352 (-)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
HLK60_RS00880 (HLK60_00880)	ldrD	195828..195935 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HLK60_RS00885 (HLK60_00885)	bcsG	196022..197701 (-)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
HLK60_RS00890 (HLK60_00890)	bcsF	197698..197889 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=391502 HLK60_RS00865 WP_001196477.1 192067..193050(+) (amiE) [Escherichia coli strain M1/5]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=391502 HLK60_RS00865 WP_001196477.1 192067..193050(+) (amiE) [Escherichia coli strain M1/5]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404