Detailed information NTG0391499

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: F1716_RS06920
• Genome accession: NZ_CP045048
• Coordinates: 1252290..1253249 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain NADC 20827
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1247290..1258249

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F1716_RS06900 (F1716_06955)	neuC	1247855..1248970 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
F1716_RS10315	-	1248967..1249881 (+)	915	Protein_1304	beta-1,4-N-acetylgalactosaminyltransferase	-
F1716_RS10320	-	1249915..1250577 (+)	663	WP_032596875.1	acylneuraminate cytidylyltransferase	-
F1716_RS06910 (F1716_06965)	-	1250572..1251423 (-)	852	WP_043020460.1	glycosyltransferase	-
F1716_RS06915 (F1716_06970)	waaV	1251407..1252231 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
F1716_RS06920 (F1716_06975)	waaF	1252290..1253249 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
F1716_RS06925 (F1716_06980)	gmhA	1253230..1253790 (-)	561	WP_002875424.1	D-sedoheptulose 7-phosphate isomerase	-
F1716_RS06930 (F1716_06985)	rfaE1	1253787..1255172 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
F1716_RS06935 (F1716_06990)	rfaD	1255165..1256118 (-)	954	WP_052794327.1	ADP-glyceromanno-heptose 6-epimerase	-
F1716_RS06940 (F1716_06995)	gmhB	1256115..1256679 (-)	565	Protein_1312	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
F1716_RS06945 (F1716_07000)	-	1256760..1257062 (+)	303	WP_002852762.1	cytochrome c	-
F1716_RS06950 (F1716_07005)	ccoS	1257085..1257291 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=391499 F1716_RS06920 WP_002875425.1 1252290..1253249(+) (waaF) [Campylobacter jejuni subsp. jejuni strain NADC 20827]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=391499 F1716_RS06920 WP_002875425.1 1252290..1253249(+) (waaF) [Campylobacter jejuni subsp. jejuni strain NADC 20827]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1