Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | F1716_RS06580 | Genome accession | NZ_CP045048 |
| Coordinates | 1182720..1183022 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni strain NADC 20827 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1177720..1188022
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1716_RS06555 (F1716_06610) | rpsR | 1178083..1178343 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| F1716_RS06560 (F1716_06615) | lon | 1178403..1180778 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| F1716_RS06565 (F1716_06620) | - | 1180795..1181442 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| F1716_RS06570 (F1716_06625) | fliW | 1181603..1181992 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| F1716_RS06575 (F1716_06630) | proC | 1181992..1182723 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| F1716_RS06580 (F1716_06635) | ctsT | 1182720..1183022 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| F1716_RS06585 (F1716_06640) | - | 1183019..1183681 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| F1716_RS06590 (F1716_06645) | - | 1183678..1184130 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| F1716_RS06595 (F1716_06650) | hemD | 1184127..1184756 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| F1716_RS06600 (F1716_06655) | thiE | 1184734..1185366 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| F1716_RS06605 (F1716_06660) | thiD | 1185356..1186168 (-) | 813 | WP_002871792.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| F1716_RS06610 (F1716_06665) | - | 1186165..1186851 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| F1716_RS06615 (F1716_06670) | - | 1186848..1187609 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=391497 F1716_RS06580 WP_002853046.1 1182720..1183022(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain NADC 20827]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=391497 F1716_RS06580 WP_002853046.1 1182720..1183022(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain NADC 20827]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |