Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   F9800_RS27595 Genome accession   NZ_CP045030
Coordinates   4197580..4198374 (-) Length   264 a.a.
NCBI ID   WP_014894889.1    Uniprot ID   A0A9X0VUZ1
Organism   Bacillus thuringiensis strain JW-1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4192580..4203374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F9800_RS27570 (F9800_27600) - 4192627..4193004 (-) 378 WP_000038769.1 hypothetical protein -
  F9800_RS27575 (F9800_27605) - 4192997..4193272 (-) 276 WP_000429761.1 helix-turn-helix domain-containing protein -
  F9800_RS27585 (F9800_27615) - 4194526..4195344 (-) 819 WP_000606604.1 MerR family transcriptional regulator -
  F9800_RS27590 (F9800_27620) - 4196443..4197414 (-) 972 WP_001058889.1 tyrosine-type recombinase/integrase -
  F9800_RS27595 (F9800_27625) spo0A 4197580..4198374 (-) 795 WP_014894889.1 sporulation transcription factor Spo0A Regulator
  F9800_RS27605 (F9800_27635) spoIVB 4198664..4199962 (-) 1299 WP_002000940.1 SpoIVB peptidase -
  F9800_RS27610 (F9800_27640) recN 4200081..4201820 (-) 1740 WP_000947759.1 DNA repair protein RecN Machinery gene
  F9800_RS27615 (F9800_27645) argR 4202085..4202534 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29385.15 Da        Isoelectric Point: 7.1175

>NTDB_id=391331 F9800_RS27595 WP_014894889.1 4197580..4198374(-) (spo0A) [Bacillus thuringiensis strain JW-1]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLADKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANAMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=391331 F9800_RS27595 WP_014894889.1 4197580..4198374(-) (spo0A) [Bacillus thuringiensis strain JW-1]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAGCAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAAAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTCGGGCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAACGCTATGATTAAACGTCCAC
TACCATCATTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAACGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACAACAGCAAGCCGTGTGGAGCGCGCAATTC
GTCACGCGATTGAAGTAGCGTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAAGCTTCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment