Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   F9800_RS12030 Genome accession   NZ_CP045030
Coordinates   1187590..1187766 (+) Length   58 a.a.
NCBI ID   WP_001003335.1    Uniprot ID   A0A9W5VN58
Organism   Bacillus thuringiensis strain JW-1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1182590..1192766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F9800_RS12010 (F9800_12025) clpC 1182921..1185521 (+) 2601 WP_000365378.1 ATP-dependent chaperone ClpB Regulator
  F9800_RS12015 (F9800_12030) - 1185560..1185742 (-) 183 WP_001211948.1 YjzD family protein -
  F9800_RS12020 (F9800_12035) - 1185899..1186633 (+) 735 WP_000028706.1 hypothetical protein -
  F9800_RS12025 (F9800_12040) - 1186663..1187535 (+) 873 WP_000486171.1 NAD-dependent epimerase/dehydratase family protein -
  F9800_RS12030 (F9800_12045) comZ 1187590..1187766 (+) 177 WP_001003335.1 ComZ family protein Regulator
  F9800_RS12035 (F9800_12050) fabH 1187998..1188930 (+) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  F9800_RS12040 (F9800_12055) fabF 1188962..1190200 (+) 1239 WP_000412645.1 beta-ketoacyl-ACP synthase II -
  F9800_RS12045 (F9800_12060) - 1190308..1191096 (+) 789 WP_000538198.1 DUF2268 domain-containing protein -
  F9800_RS12050 (F9800_12065) - 1191240..1191986 (+) 747 WP_000966119.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6575.71 Da        Isoelectric Point: 4.4184

>NTDB_id=391313 F9800_RS12030 WP_001003335.1 1187590..1187766(+) (comZ) [Bacillus thuringiensis strain JW-1]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQQ

Nucleotide


Download         Length: 177 bp        

>NTDB_id=391313 F9800_RS12030 WP_001003335.1 1187590..1187766(+) (comZ) [Bacillus thuringiensis strain JW-1]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCACAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAACAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment