Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   DDE73_RS24060 Genome accession   NZ_CP044978
Coordinates   4685799..4686257 (+) Length   152 a.a.
NCBI ID   WP_000804870.1    Uniprot ID   A0A9W5P1U9
Organism   Bacillus thuringiensis strain BT62     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4680799..4691257
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DDE73_RS24045 (DDE73_24055) - 4681468..4681704 (+) 237 WP_000283738.1 hypothetical protein -
  DDE73_RS24050 (DDE73_24060) - 4681866..4683974 (-) 2109 WP_103621546.1 polyphosphate kinase -
  DDE73_RS24055 (DDE73_24065) ppx 4684083..4685657 (-) 1575 WP_142390972.1 exopolyphosphatase -
  DDE73_RS24060 (DDE73_24070) kre 4685799..4686257 (+) 459 WP_000804870.1 YkyB family protein Regulator
  DDE73_RS24065 (DDE73_24075) - 4686289..4686951 (-) 663 WP_000922498.1 YkyA family protein -
  DDE73_RS24070 (DDE73_24080) - 4687565..4688218 (-) 654 WP_000680820.1 diguanylate cyclase -
  DDE73_RS24075 (DDE73_24085) - 4688382..4688615 (+) 234 WP_000939448.1 SPP1 phage holin family protein -
  DDE73_RS24080 (DDE73_24090) - 4688647..4689147 (-) 501 WP_103621544.1 hypothetical protein -
  DDE73_RS24085 (DDE73_24095) - 4689559..4691100 (+) 1542 WP_000449912.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17787.52 Da        Isoelectric Point: 10.6793

>NTDB_id=391118 DDE73_RS24060 WP_000804870.1 4685799..4686257(+) (kre) [Bacillus thuringiensis strain BT62]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTTLERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=391118 DDE73_RS24060 WP_000804870.1 4685799..4686257(+) (kre) [Bacillus thuringiensis strain BT62]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAACTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTGCATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGTGAGCCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.793

76.316

0.487

Multiple sequence alignment