Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | DDE73_RS14350 | Genome accession | NZ_CP044978 |
| Coordinates | 2767748..2768035 (+) | Length | 95 a.a. |
| NCBI ID | WP_061457084.1 | Uniprot ID | - |
| Organism | Bacillus thuringiensis strain BT62 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2762748..2773035
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DDE73_RS14330 (DDE73_14335) | - | 2763918..2764115 (+) | 198 | WP_002183486.1 | DUF4083 domain-containing protein | - |
| DDE73_RS14335 (DDE73_14340) | - | 2764147..2764608 (+) | 462 | WP_000024992.1 | NUDIX hydrolase | - |
| DDE73_RS14340 (DDE73_14345) | nadE | 2764658..2765476 (-) | 819 | WP_000174896.1 | ammonia-dependent NAD(+) synthetase | - |
| DDE73_RS14345 (DDE73_14350) | - | 2765751..2767631 (+) | 1881 | WP_001025990.1 | ABC transporter permease | - |
| DDE73_RS14350 (DDE73_14355) | abrB | 2767748..2768035 (+) | 288 | WP_061457084.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| DDE73_RS14355 (DDE73_14360) | - | 2768311..2769258 (+) | 948 | WP_103622877.1 | S8 family peptidase | - |
| DDE73_RS14360 (DDE73_14365) | - | 2769300..2769608 (-) | 309 | WP_001259906.1 | helix-turn-helix transcriptional regulator | - |
| DDE73_RS14365 (DDE73_14370) | - | 2769715..2770650 (+) | 936 | WP_103622876.1 | aldo/keto reductase | - |
| DDE73_RS14370 (DDE73_14375) | - | 2770698..2771873 (+) | 1176 | WP_048655667.1 | MFS transporter | - |
| DDE73_RS32500 (DDE73_14380) | - | 2771922..2772128 (+) | 207 | WP_001101738.1 | hypothetical protein | - |
| DDE73_RS14380 (DDE73_14385) | - | 2772272..2772634 (+) | 363 | WP_001198796.1 | DUF805 domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10515.25 Da Isoelectric Point: 5.1367
>NTDB_id=391111 DDE73_RS14350 WP_061457084.1 2767748..2768035(+) (abrB) [Bacillus thuringiensis strain BT62]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEADKIILQKYQPYNACQITGDVSEQNISLANGNITVGIEGAE
YLVKEIGKFLNKSEV
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEADKIILQKYQPYNACQITGDVSEQNISLANGNITVGIEGAE
YLVKEIGKFLNKSEV
Nucleotide
Download Length: 288 bp
>NTDB_id=391111 DDE73_RS14350 WP_061457084.1 2767748..2768035(+) (abrB) [Bacillus thuringiensis strain BT62]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATCCCTAAAGAATTACGCGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTTGTAGAAGCAGATAAAATCATTTTACAAAAATATCAACCTTACAATGCTT
GCCAAATCACAGGTGATGTTTCAGAACAGAACATATCATTAGCAAATGGAAATATTACTGTTGGGATAGAGGGAGCGGAA
TATTTAGTAAAAGAAATAGGAAAGTTTTTAAACAAGAGTGAGGTTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATCCCTAAAGAATTACGCGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTTGTAGAAGCAGATAAAATCATTTTACAAAAATATCAACCTTACAATGCTT
GCCAAATCACAGGTGATGTTTCAGAACAGAACATATCATTAGCAAATGGAAATATTACTGTTGGGATAGAGGGAGCGGAA
TATTTAGTAAAAGAAATAGGAAAGTTTTTAAACAAGAGTGAGGTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.977 |
90.526 |
0.516 |