Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   DDE73_RS10295 Genome accession   NZ_CP044978
Coordinates   1965899..1966582 (+) Length   227 a.a.
NCBI ID   WP_000350713.1    Uniprot ID   A0A9W5RA28
Organism   Bacillus thuringiensis strain BT62     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1960899..1971582
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DDE73_RS10270 (DDE73_10275) - 1961960..1963606 (+) 1647 WP_103622972.1 peptide ABC transporter substrate-binding protein -
  DDE73_RS10275 (DDE73_10280) - 1963637..1963840 (-) 204 WP_000559971.1 hypothetical protein -
  DDE73_RS10285 (DDE73_10290) spx 1964434..1964829 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  DDE73_RS10290 (DDE73_10295) - 1964879..1965553 (-) 675 WP_000362607.1 TerC family protein -
  DDE73_RS10295 (DDE73_10300) mecA 1965899..1966582 (+) 684 WP_000350713.1 adaptor protein MecA Regulator
  DDE73_RS10300 (DDE73_10305) - 1966655..1968199 (+) 1545 WP_000799194.1 cardiolipin synthase -
  DDE73_RS10305 (DDE73_10310) - 1968280..1969524 (+) 1245 WP_000628315.1 competence protein CoiA family protein -
  DDE73_RS10310 (DDE73_10315) pepF 1969576..1971402 (+) 1827 WP_017672793.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27010.06 Da        Isoelectric Point: 3.9822

>NTDB_id=391106 DDE73_RS10295 WP_000350713.1 1965899..1966582(+) (mecA) [Bacillus thuringiensis strain BT62]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=391106 DDE73_RS10295 WP_000350713.1 1965899..1966582(+) (mecA) [Bacillus thuringiensis strain BT62]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGACAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAACAAGAATTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559


Multiple sequence alignment