Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | DDE73_RS04350 | Genome accession | NZ_CP044978 |
| Coordinates | 826769..827053 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843036.1 | Uniprot ID | A0A9W5VII1 |
| Organism | Bacillus thuringiensis strain BT62 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 821769..832053
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DDE73_RS04315 (DDE73_04320) | tmk | 821961..822587 (+) | 627 | WP_000677218.1 | dTMP kinase | - |
| DDE73_RS04320 (DDE73_04325) | holB | 822623..823606 (+) | 984 | WP_098583711.1 | DNA polymerase III subunit delta' | - |
| DDE73_RS04325 (DDE73_04330) | - | 823612..824439 (+) | 828 | WP_000272429.1 | stage 0 sporulation family protein | - |
| DDE73_RS04330 (DDE73_04335) | yabA | 824454..824804 (+) | 351 | WP_000412063.1 | DNA replication initiation control protein YabA | - |
| DDE73_RS04335 (DDE73_04340) | - | 824887..825627 (+) | 741 | WP_001055366.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| DDE73_RS04340 (DDE73_04345) | - | 825614..825904 (+) | 291 | WP_000414350.1 | GIY-YIG nuclease family protein | - |
| DDE73_RS04345 (DDE73_04350) | rsmI | 825873..826748 (+) | 876 | WP_103621433.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| DDE73_RS04350 (DDE73_04355) | abrB | 826769..827053 (-) | 285 | WP_000843036.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| DDE73_RS04355 (DDE73_04360) | metG | 827512..829521 (+) | 2010 | WP_071699964.1 | methionine--tRNA ligase | - |
| DDE73_RS04360 (DDE73_04365) | - | 829688..830455 (+) | 768 | WP_000895851.1 | TatD family hydrolase | - |
| DDE73_RS04365 (DDE73_04370) | rnmV | 830670..831227 (+) | 558 | WP_000692835.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10490.17 Da Isoelectric Point: 4.7174
>NTDB_id=391093 DDE73_RS04350 WP_000843036.1 826769..827053(-) (abrB) [Bacillus thuringiensis strain BT62]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=391093 DDE73_RS04350 WP_000843036.1 826769..827053(-) (abrB) [Bacillus thuringiensis strain BT62]
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGACGCTCTTGAAATCTATGTTGATGACGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGACGGTAACCTTTCTTTAGCTGAAGGTAAAATCATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGACGCTCTTGAAATCTATGTTGATGACGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGACGGTAACCTTTCTTTAGCTGAAGGTAAAATCATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
85.106 |
100 |
0.851 |