Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | F9Z44_RS04990 | Genome accession | NZ_CP044972 |
| Coordinates | 1030676..1031701 (-) | Length | 341 a.a. |
| NCBI ID | WP_159604130.1 | Uniprot ID | A0A6P1IIZ6 |
| Organism | Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B4) | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1025676..1036701
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F9Z44_RS04955 (F9Z44_04960) | - | 1026643..1027131 (-) | 489 | WP_159604116.1 | DoxX family protein | - |
| F9Z44_RS04960 (F9Z44_04965) | - | 1027128..1027946 (-) | 819 | WP_159604118.1 | DNA-binding domain-containing protein | - |
| F9Z44_RS04965 (F9Z44_04970) | - | 1027943..1028854 (-) | 912 | WP_159604120.1 | DUF692 domain-containing protein | - |
| F9Z44_RS04970 (F9Z44_04975) | - | 1028883..1029161 (-) | 279 | WP_159604122.1 | DUF2282 domain-containing protein | - |
| F9Z44_RS04975 (F9Z44_04980) | - | 1029297..1029821 (-) | 525 | WP_159604124.1 | TlpA disulfide reductase family protein | - |
| F9Z44_RS04980 (F9Z44_04985) | - | 1029881..1030465 (+) | 585 | WP_159604126.1 | sigma-70 family RNA polymerase sigma factor | - |
| F9Z44_RS04985 (F9Z44_04990) | - | 1030462..1030671 (+) | 210 | WP_159604128.1 | zf-HC2 domain-containing protein | - |
| F9Z44_RS04990 (F9Z44_04995) | pilA | 1030676..1031701 (-) | 1026 | WP_159604130.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| F9Z44_RS04995 (F9Z44_05000) | - | 1031731..1033134 (+) | 1404 | WP_159604132.1 | pitrilysin family protein | - |
| F9Z44_RS05000 (F9Z44_05005) | - | 1033131..1034477 (+) | 1347 | WP_159604134.1 | pitrilysin family protein | - |
| F9Z44_RS05005 (F9Z44_05010) | rsmD | 1034513..1035127 (+) | 615 | WP_159604136.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| F9Z44_RS05010 (F9Z44_05015) | coaD | 1035164..1035682 (+) | 519 | WP_159604138.1 | pantetheine-phosphate adenylyltransferase | - |
| F9Z44_RS05015 (F9Z44_05020) | - | 1035699..1035992 (+) | 294 | WP_159604140.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| F9Z44_RS05020 (F9Z44_05025) | pth | 1035947..1036600 (-) | 654 | WP_159604142.1 | aminoacyl-tRNA hydrolase | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 36084.66 Da Isoelectric Point: 9.3925
>NTDB_id=391049 F9Z44_RS04990 WP_159604130.1 1030676..1031701(-) (pilA) [Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B4)]
MFSFFRKKAPTAPSPATPTTSAAPPAVAPAVELAQQPPTAAPVRQGWLDKLKNGLRKTGSSITTVFTGTQIDDALYEELE
AALLMADTGVKATTHLLADLKRRVKENKTTDPAAVKGLLADAITELLTPLQKPLVIGEHKPTVIMVAGVNGAGKTTSIGK
LTRHLAQSGASVLLAAADTFRAAAREQLAVWADRNTVEIITQQGGDPAAVSFDAVTAGRARGRDVVLVDTAGRLPTQLHL
MEELRKIKRVVQKADPTAPHEVLLVIDGNTGQNALMQVRAFDEALGLTGLVITKLDGTAKGGVICAIAREKPVPIYFIGV
GEKLEDLETFNAREFAQALLS
MFSFFRKKAPTAPSPATPTTSAAPPAVAPAVELAQQPPTAAPVRQGWLDKLKNGLRKTGSSITTVFTGTQIDDALYEELE
AALLMADTGVKATTHLLADLKRRVKENKTTDPAAVKGLLADAITELLTPLQKPLVIGEHKPTVIMVAGVNGAGKTTSIGK
LTRHLAQSGASVLLAAADTFRAAAREQLAVWADRNTVEIITQQGGDPAAVSFDAVTAGRARGRDVVLVDTAGRLPTQLHL
MEELRKIKRVVQKADPTAPHEVLLVIDGNTGQNALMQVRAFDEALGLTGLVITKLDGTAKGGVICAIAREKPVPIYFIGV
GEKLEDLETFNAREFAQALLS
Nucleotide
Download Length: 1026 bp
>NTDB_id=391049 F9Z44_RS04990 WP_159604130.1 1030676..1031701(-) (pilA) [Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B4)]
ATGTTCTCGTTCTTTCGCAAAAAAGCCCCCACTGCGCCCTCACCGGCCACCCCCACGACCTCCGCAGCCCCCCCTGCGGT
GGCCCCTGCCGTCGAACTGGCGCAGCAGCCACCCACCGCCGCACCCGTGCGCCAGGGCTGGCTGGACAAGCTCAAGAACG
GTCTGCGCAAGACCGGATCGAGCATCACCACGGTCTTCACCGGCACCCAGATCGACGATGCCCTGTACGAAGAGCTCGAA
GCCGCGCTGCTGATGGCCGACACCGGCGTGAAGGCCACCACCCACCTGCTGGCCGATCTCAAGCGCCGGGTCAAGGAGAA
CAAGACCACCGATCCCGCCGCCGTCAAGGGTCTGCTGGCCGATGCCATCACCGAGTTGCTGACCCCGTTGCAGAAGCCGC
TGGTGATTGGCGAGCACAAGCCCACCGTGATCATGGTGGCCGGCGTCAACGGCGCCGGCAAGACCACTTCCATCGGCAAG
CTCACGCGCCACCTGGCGCAAAGCGGCGCCAGCGTGCTGCTGGCCGCCGCCGACACCTTTCGCGCTGCCGCGCGCGAACA
GCTCGCGGTGTGGGCCGACCGGAACACGGTGGAGATCATCACGCAGCAGGGCGGCGACCCGGCCGCGGTGAGCTTTGATG
CCGTGACCGCCGGGCGCGCACGCGGACGCGACGTGGTGCTGGTGGACACCGCCGGGCGCCTGCCGACCCAGCTGCATCTG
ATGGAAGAGCTGCGCAAGATCAAACGCGTGGTGCAGAAGGCCGATCCGACCGCGCCCCATGAAGTCTTGCTCGTCATCGA
TGGCAACACCGGCCAGAACGCGCTGATGCAGGTGAGGGCTTTCGACGAGGCGCTGGGCCTCACGGGTCTGGTCATCACCA
AGCTCGACGGCACGGCCAAGGGTGGCGTGATCTGTGCGATCGCACGCGAAAAGCCTGTGCCGATCTACTTCATCGGCGTG
GGTGAAAAGCTGGAAGACCTGGAAACCTTCAACGCGCGTGAATTTGCGCAGGCGCTGCTGTCCTGA
ATGTTCTCGTTCTTTCGCAAAAAAGCCCCCACTGCGCCCTCACCGGCCACCCCCACGACCTCCGCAGCCCCCCCTGCGGT
GGCCCCTGCCGTCGAACTGGCGCAGCAGCCACCCACCGCCGCACCCGTGCGCCAGGGCTGGCTGGACAAGCTCAAGAACG
GTCTGCGCAAGACCGGATCGAGCATCACCACGGTCTTCACCGGCACCCAGATCGACGATGCCCTGTACGAAGAGCTCGAA
GCCGCGCTGCTGATGGCCGACACCGGCGTGAAGGCCACCACCCACCTGCTGGCCGATCTCAAGCGCCGGGTCAAGGAGAA
CAAGACCACCGATCCCGCCGCCGTCAAGGGTCTGCTGGCCGATGCCATCACCGAGTTGCTGACCCCGTTGCAGAAGCCGC
TGGTGATTGGCGAGCACAAGCCCACCGTGATCATGGTGGCCGGCGTCAACGGCGCCGGCAAGACCACTTCCATCGGCAAG
CTCACGCGCCACCTGGCGCAAAGCGGCGCCAGCGTGCTGCTGGCCGCCGCCGACACCTTTCGCGCTGCCGCGCGCGAACA
GCTCGCGGTGTGGGCCGACCGGAACACGGTGGAGATCATCACGCAGCAGGGCGGCGACCCGGCCGCGGTGAGCTTTGATG
CCGTGACCGCCGGGCGCGCACGCGGACGCGACGTGGTGCTGGTGGACACCGCCGGGCGCCTGCCGACCCAGCTGCATCTG
ATGGAAGAGCTGCGCAAGATCAAACGCGTGGTGCAGAAGGCCGATCCGACCGCGCCCCATGAAGTCTTGCTCGTCATCGA
TGGCAACACCGGCCAGAACGCGCTGATGCAGGTGAGGGCTTTCGACGAGGCGCTGGGCCTCACGGGTCTGGTCATCACCA
AGCTCGACGGCACGGCCAAGGGTGGCGTGATCTGTGCGATCGCACGCGAAAAGCCTGTGCCGATCTACTTCATCGGCGTG
GGTGAAAAGCTGGAAGACCTGGAAACCTTCAACGCGCGTGAATTTGCGCAGGCGCTGCTGTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
53.372 |
100 |
0.534 |