Detailed information NTG0391003

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HHJ51_RS12050
• Genome accession: NZ_CP053247
• Coordinates: 2481125..2482108 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain SCU-482
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2476125..2487108

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ51_RS12035 (HHJ51_12030)	dppA	2477425..2479032 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
HHJ51_RS12040 (HHJ51_12035)	dppB	2479183..2480202 (+)	1020	WP_000938865.1	dipeptide ABC transporter permease DppB	-
HHJ51_RS12045 (HHJ51_12040)	dppC	2480212..2481114 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HHJ51_RS12050 (HHJ51_12045)	amiE	2481125..2482108 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
HHJ51_RS12055 (HHJ51_12050)	dppF	2482105..2483109 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HHJ51_RS12060 (HHJ51_12055)	yhjV	2483139..2484410 (-)	1272	WP_001309838.1	aromatic amino acid transport family protein	-
HHJ51_RS12065 (HHJ51_12060)	-	2484886..2484993 (+)	108	WP_000170743.1	type I toxin-antitoxin system toxin Ldr family protein	-
HHJ51_RS12070 (HHJ51_12065)	-	2485369..2485476 (+)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=391003 HHJ51_RS12050 WP_001196486.1 2481125..2482108(+) (amiE) [Escherichia coli strain SCU-482]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=391003 HHJ51_RS12050 WP_001196486.1 2481125..2482108(+) (amiE) [Escherichia coli strain SCU-482]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAGCTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404