Detailed information NTG0390956

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: F9K07_RS20395
• Genome accession: NZ_CP044549
• Coordinates: 4385838..4386893 (+)
• Length: 351 a.a.
• NCBI ID: WP_159595164.1
• Uniprot ID: A0A6P1IXV6
• Organism: Hydrogenophaga sp. BPS33
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4380838..4391893

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F9K07_RS20365 (F9K07_20330)	pth	4380886..4381539 (+)	654	WP_159595158.1	aminoacyl-tRNA hydrolase	-
F9K07_RS20370 (F9K07_20335)	-	4381494..4381787 (-)	294	WP_159595159.1	YfhL family 4Fe-4S dicluster ferredoxin	-
F9K07_RS20375 (F9K07_20340)	coaD	4381800..4382318 (-)	519	WP_159595160.1	pantetheine-phosphate adenylyltransferase	-
F9K07_RS20380 (F9K07_20345)	rsmD	4382355..4382969 (-)	615	WP_159595161.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
F9K07_RS20385 (F9K07_20350)	-	4382994..4384280 (-)	1287	WP_236582039.1	pitrilysin family protein	-
F9K07_RS20390 (F9K07_20355)	-	4384366..4385796 (-)	1431	WP_159595163.1	pitrilysin family protein	-
F9K07_RS20395 (F9K07_20360)	pilA	4385838..4386893 (+)	1056	WP_159595164.1	signal recognition particle-docking protein FtsY	Machinery gene
F9K07_RS20400 (F9K07_20365)	-	4386890..4387729 (+)	840	WP_159595165.1	undecaprenyl-diphosphate phosphatase	-
F9K07_RS20405 (F9K07_20370)	creD	4387912..4389225 (-)	1314	WP_159595166.1	cell envelope integrity protein CreD	-
F9K07_RS20410 (F9K07_20375)	creC	4389320..4390759 (-)	1440	WP_159595167.1	two-component system sensor histidine kinase CreC	-
F9K07_RS20415 (F9K07_20380)	creB	4390778..4391485 (-)	708	WP_159595168.1	two-component system response regulator CreB	-

Sequence

Protein

• Length: 351 a.a.
• Molecular weight: 37071.86 Da
• Isoelectric Point: 6.1632

>NTDB_id=390956 F9K07_RS20395 WP_159595164.1 4385838..4386893(+) (pilA) [Hydrogenophaga sp. BPS33]
MFSFFRKKPPAPPAEPAPDLTEPPAPVPEAPTPPTVAAPVAMAVAVAVAAPPERKGWLDKLKSGLRKTGSSIATVFTGTQ
IDEALYEELEAALLMADTGVKATTDLLVDLKRRVKENKTTDPKAVKGLLADAITDLLAPLQKPLVIGEHKPTVVMVAGVN
GAGKTTSIGKLTRHLADEGATVLLAAADTFRAAAREQLAVWADRNTVEIITQQGGDPAAVSFDAVTAGKARGRDVVLVDT
AGRLPTQLHLMEELRKIKRVVQKAEASAPHEVLLVIDGNTGQNALNQVKAFDDALQLTGLIITKLDGTAKGGVLCAIARE
KPVPVYFIGVGEKLEDLETFDAREFAQALLS

Nucleotide

• Length: 1056 bp

>NTDB_id=390956 F9K07_RS20395 WP_159595164.1 4385838..4386893(+) (pilA) [Hydrogenophaga sp. BPS33]
ATGTTCTCGTTCTTTCGAAAAAAGCCCCCCGCTCCCCCCGCCGAGCCCGCGCCGGATCTGACCGAGCCCCCTGCTCCCGT
CCCCGAGGCACCCACGCCGCCCACGGTCGCCGCGCCGGTTGCGATGGCCGTGGCCGTGGCCGTGGCCGCGCCGCCCGAGC
GCAAGGGTTGGCTCGACAAGCTCAAGTCCGGCCTGCGCAAGACCGGCTCCAGCATCGCCACGGTGTTCACCGGCACGCAG
ATCGACGAAGCGCTGTACGAGGAGCTGGAAGCGGCCCTGCTCATGGCCGACACGGGCGTGAAGGCCACGACCGATCTGCT
GGTCGACCTCAAGCGCCGCGTGAAAGAGAACAAGACCACCGACCCGAAAGCCGTCAAGGGCCTGCTGGCCGATGCCATCA
CCGACCTGCTCGCGCCGCTGCAAAAGCCGCTGGTGATCGGCGAGCACAAACCCACCGTGGTCATGGTGGCCGGCGTCAAC
GGCGCGGGCAAGACGACCTCCATCGGCAAACTGACACGCCACTTGGCCGATGAGGGCGCGACCGTGCTGCTGGCCGCTGC
CGACACCTTCCGCGCGGCCGCGCGCGAGCAGCTCGCCGTCTGGGCCGACCGCAACACGGTGGAGATCATCACCCAGCAAG
GCGGCGACCCTGCGGCCGTGAGCTTCGACGCGGTCACCGCGGGCAAGGCGCGCGGGCGCGACGTGGTGCTGGTCGACACC
GCCGGGCGCCTGCCCACCCAACTGCACCTGATGGAAGAGCTGCGCAAGATCAAGCGCGTGGTGCAAAAGGCCGAGGCCAG
CGCGCCGCACGAAGTGCTGCTGGTGATCGATGGCAACACCGGGCAGAACGCGCTCAACCAGGTGAAGGCGTTCGACGACG
CGCTGCAGCTCACCGGCCTCATCATCACCAAACTCGACGGCACGGCCAAAGGCGGCGTGCTCTGCGCCATCGCACGCGAG
AAACCGGTACCGGTCTATTTCATCGGCGTGGGCGAAAAGCTCGAAGATCTCGAAACCTTCGACGCACGCGAATTCGCCCA
GGCATTGCTCTCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (151-350)

• SRP54-type protein, helical bundle domain (SRP54_N) (70-132)

3D structure

• AlphaFold DB: A0A6P1IXV6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.196	98.86	0.556