Detailed information NTG0390914

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HHJ54_RS07600
• Genome accession: NZ_CP053245
• Coordinates: 1620795..1621778 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain SCU-485
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1615795..1626778

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ54_RS07575 (HHJ54_07575)	bcsF	1615957..1616148 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
HHJ54_RS07580 (HHJ54_07580)	bcsG	1616145..1617824 (+)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
HHJ54_RS07585 (HHJ54_07585)	ldrD	1617910..1618017 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HHJ54_RS07590 (HHJ54_07590)	yhjV	1618493..1619764 (+)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
HHJ54_RS07595 (HHJ54_07595)	dppF	1619794..1620798 (-)	1005	WP_000103570.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HHJ54_RS07600 (HHJ54_07600)	amiE	1620795..1621778 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
HHJ54_RS07605 (HHJ54_07605)	dppC	1621789..1622691 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HHJ54_RS07610 (HHJ54_07610)	dppB	1622701..1623720 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HHJ54_RS07615 (HHJ54_07615)	dppA	1624027..1625634 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=390914 HHJ54_RS07600 WP_001196477.1 1620795..1621778(-) (amiE) [Escherichia coli strain SCU-485]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=390914 HHJ54_RS07600 WP_001196477.1 1620795..1621778(-) (amiE) [Escherichia coli strain SCU-485]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404