Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   NLA_RS08895 Genome accession   NC_014752
Coordinates   1841193..1843235 (-) Length   680 a.a.
NCBI ID   WP_013449432.1    Uniprot ID   E4ZEZ0
Organism   Neisseria lactamica 020-06     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1836193..1848235
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLA_RS08860 (NLA_17150) queC 1836715..1837374 (-) 660 WP_013449427.1 7-cyano-7-deazaguanine synthase QueC -
  NLA_RS08875 (NLA_17180) - 1837891..1839111 (+) 1221 WP_013449429.1 YihY family inner membrane protein -
  NLA_RS08880 (NLA_17190) - 1839116..1839565 (+) 450 WP_013449430.1 DUF6636 domain-containing protein -
  NLA_RS08885 (NLA_17200) argC 1839639..1840682 (+) 1044 WP_013449431.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  NLA_RS12870 - 1840725..1841114 (+) 390 WP_148230232.1 hypothetical protein -
  NLA_RS08895 (NLA_17210) recG 1841193..1843235 (-) 2043 WP_013449432.1 ATP-dependent DNA helicase RecG Machinery gene
  NLA_RS08900 (NLA_17220) secB 1843321..1843764 (-) 444 WP_002229859.1 protein-export chaperone SecB -
  NLA_RS08905 (NLA_17230) grxC 1843785..1844042 (-) 258 WP_002214462.1 glutaredoxin 3 -
  NLA_RS08910 (NLA_17240) rng 1844256..1845749 (+) 1494 WP_013449433.1 ribonuclease G -
  NLA_RS11875 - 1845892..1846571 (+) 680 Protein_1783 transposase -
  NLA_RS08920 (NLA_17260) - 1846616..1846993 (-) 378 WP_013449435.1 hypothetical protein -
  NLA_RS08925 (NLA_17270) - 1847039..1847350 (-) 312 WP_042508255.1 MoaF-related domain-containing protein -
  NLA_RS08930 (NLA_17280) - 1847401..1847775 (-) 375 WP_013449437.1 nuclear transport factor 2 family protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 75015.17 Da        Isoelectric Point: 8.4912

>NTDB_id=39079 NLA_RS08895 WP_013449432.1 1841193..1843235(-) (recG) [Neisseria lactamica 020-06]
MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYAGHQKQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRVSGTA
AALRGNGVLTQALRQALPFALTDAQEKVVSEICRDMAQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDKLPPGRTPIKTRLVNNVRRAEVEGFVLGTCRKGRQAYWVCPLI
EESETLQLQTAAETLARLQTALPELNIGLVHGRMKAAEKAEVMTRFSSGELNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQARETAPMLIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=39079 NLA_RS08895 WP_013449432.1 1841193..1843235(-) (recG) [Neisseria lactamica 020-06]
ATGATGTCGCCCGAAACCCAGAAACAGCTCAAAATCACCGATGTTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGATGCGCCGATCG
GCGTGCCGTGTCAGGTCGAGGGGGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGCTGATTGTCCAAATC
GCCGACGGTTCCGGCAGCGTCCTTTTTCTGCGCTTCATCCACTTTTACGCCGGCCATCAGAAACAGACGGCGGTCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGGTTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGCATCATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACGCTGCCCGATGCCCTGCTGTGCCGTCTGAAGCTGCCGCACCTTGC
CGAAAGCCTGCGCCTTTTGCATTCGCCGCCGCCGAGTTTCACGATTCATCAGCTTTCAGACGGCACGCTGCCTGCATGGC
AACGGCTCAAATTCGACGAACTTTTGGCGCAACAGCTTTCGATGCGGCTGGCGCGACAGAAGCGTGTCAGCGGCACGGCG
GCGGCATTGCGCGGCAATGGCGTATTGACCCAAGCCCTGCGCCAAGCCCTGCCGTTTGCCCTGACCGATGCGCAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGATATGGCGCAAACCTACCCGATGCACCGCCTGCTGCAGGGCGATGTCGGCAGCGGCA
AAACCATTGTGGCTGCTTTGTCTGCTTTGACGGCTATCGAATCCGGTGCGCAGGTTGCCGTGATGGCGCCGACCGAAATC
CTTGCCGAACAACATTTCATCAAGTTCAAACAATGGCTTGAGCCTTTGGGTATTGAGGTTGTCCGCCTTTTTGGCAGTTT
GCGTAAAAAAGCTAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGGCGTGGCGTTTCACAATTTGGGCCTGACCATCGTGGACGAACAGCACCGTTTCGGCGTTGCCCAACGCCTC
GCCCTCAAAAACAAAGGGCGCGAAGTCCATCAGCTGATGATGTCCGCCACGCCCATCCCGCGCACGCTTGCGATGAGTTT
TTTCGCCGATTTGGACGTGTCCGTCATCGACAAACTGCCGCCCGGGCGCACCCCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCGGCACTTGCCGAAAAGGGCGGCAGGCGTATTGGGTTTGTCCGCTGATT
GAAGAAAGCGAAACCCTGCAATTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAGCTGAATAT
CGGACTGGTACACGGGCGTATGAAGGCCGCCGAAAAGGCCGAAGTGATGACGCGGTTTTCTTCGGGGGAGCTGAATGTCT
TGGTCGCCACCACCGTTATCGAAGTCGGCGTAGATGTGCCCAATGCTGCCCTGATGGTCATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTGCACCAATTACGCGGGCGGGTAGGGCGCGGCGCGGCAGAAAGCGTGTGCGTCCTCTTATTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGTTGAAAGTGATTTACGAACACACCGACGGCTTTGAAATCGCCCGCCAAGACC
TCAACATCCGCGGCCCCGGCGAATTTCTCGGCGCGCGTCAAAGCGGCGTGCCTATGCTGCGCTTCGCCAAGCTTGAAGAA
GACCTGCACCTTTTGGAACAGGCGCGTGAAACCGCCCCGATGCTGATTGAACAAAACCCCGAAATCGTCGAGGCGCATCT
GGCACGATGGCTTTCCGGCAGGGAAGGGTATTTGGGCGTGTGA

Domains

Predicted by InterproScan.

Helicase conserved C-terminal domain (Helicase_C)

(468-575)

DEAD/DEAH box helicase (DEAD)

(262-421)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

RecG wedge domain (RecG_wedge)

(15-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E4ZEZ0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

98.529

100

0.985

Multiple sequence alignment