Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | F7R97_RS08355 | Genome accession | NZ_CP044517 |
| Coordinates | 1763967..1764347 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836912.1 | Uniprot ID | A0AAP1R0C8 |
| Organism | Acinetobacter baumannii strain 31FS3-2 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1758967..1769347
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7R97_RS08325 (F7R97_08455) | kdsB | 1759870..1760631 (+) | 762 | WP_140951667.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| F7R97_RS08330 (F7R97_08460) | - | 1760643..1761623 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| F7R97_RS08335 (F7R97_08465) | - | 1761635..1761976 (+) | 342 | WP_001183025.1 | PilZ domain-containing protein | - |
| F7R97_RS08340 (F7R97_08470) | - | 1761994..1762767 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| F7R97_RS08345 (F7R97_08475) | - | 1762805..1763413 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| F7R97_RS08350 (F7R97_08480) | - | 1763423..1763977 (+) | 555 | WP_075400334.1 | type II secretion system protein | - |
| F7R97_RS08355 (F7R97_08485) | xcpV | 1763967..1764347 (+) | 381 | WP_000836912.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| F7R97_RS08360 (F7R97_08490) | xcpW | 1764347..1765048 (+) | 702 | WP_000594582.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| F7R97_RS08365 (F7R97_08495) | gspK | 1765048..1766007 (+) | 960 | WP_140951666.1 | type II secretion system minor pseudopilin GspK | - |
| F7R97_RS08370 (F7R97_08500) | - | 1766237..1766833 (+) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| F7R97_RS08375 (F7R97_08505) | ung | 1766884..1767597 (+) | 714 | WP_001177530.1 | uracil-DNA glycosylase | - |
| F7R97_RS08380 (F7R97_08510) | - | 1767594..1768718 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| F7R97_RS08385 (F7R97_08515) | tadA | 1768725..1769228 (+) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13965.16 Da Isoelectric Point: 9.8004
>NTDB_id=390741 F7R97_RS08355 WP_000836912.1 1763967..1764347(+) (xcpV) [Acinetobacter baumannii strain 31FS3-2]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYSVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYSVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=390741 F7R97_RS08355 WP_000836912.1 1763967..1764347(+) (xcpV) [Acinetobacter baumannii strain 31FS3-2]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATTCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATTCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |