Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   NMBM01240355_RS10730 Genome accession   NC_017517
Coordinates   2108659..2109627 (+) Length   322 a.a.
NCBI ID   WP_014582294.1    Uniprot ID   -
Organism   Neisseria meningitidis M01-240355     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2103659..2114627
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBM01240355_RS15390 - 2103741..2103887 (-) 147 WP_002240086.1 hypothetical protein -
  NMBM01240355_RS10720 (NMBM01240355_1917) fetA 2104669..2106831 (+) 2163 WP_002221665.1 TonB-dependent siderophore receptor FetA/FrpB -
  NMBM01240355_RS10725 (NMBM01240355_1918) - 2107530..2108495 (+) 966 WP_014582293.1 siderophore ABC transporter substrate-binding protein -
  NMBM01240355_RS15560 - 2108513..2108662 (+) 150 WP_162013446.1 hypothetical protein -
  NMBM01240355_RS10730 (NMBM01240355_1919) ceuB 2108659..2109627 (+) 969 WP_014582294.1 ABC transporter permease Machinery gene
  NMBM01240355_RS10735 (NMBM01240355_1920) - 2109617..2110591 (+) 975 WP_014582295.1 iron chelate uptake ABC transporter family permease subunit -
  NMBM01240355_RS10740 (NMBM01240355_1921) - 2110636..2111262 (+) 627 WP_014582296.1 FmdE family protein -
  NMBM01240355_RS10745 (NMBM01240355_1922) - 2111345..2112103 (+) 759 WP_014582297.1 ABC transporter ATP-binding protein -
  NMBM01240355_RS15395 - 2112118..2112261 (+) 144 WP_153957318.1 hypothetical protein -
  NMBM01240355_RS10750 (NMBM01240355_1923) - 2112408..2113381 (+) 974 Protein_2030 YadA C-terminal domain-containing protein -
  NMBM01240355_RS10755 (NMBM01240355_1924) - 2113447..2113785 (-) 339 WP_014582298.1 P-II family nitrogen regulator -
  NMBM01240355_RS13775 - 2113880..2114092 (+) 213 WP_078835863.1 hypothetical protein -

Sequence


Protein


Download         Length: 322 a.a.        Molecular weight: 34443.71 Da        Isoelectric Point: 10.0891

>NTDB_id=39072 NMBM01240355_RS10730 WP_014582294.1 2108659..2109627(+) (ceuB) [Neisseria meningitidis M01-240355]
MTAKPFSLNLTNLLLLAVLFAVSLSVGVADFRWSDVFSLSDSQQVMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFV
EPSMAGAGQSAALGLLLMSLLLPAAPLPVKMSVAAVAALIGMLVFMMLIRRLPPTAQLMVPLVGIIFGSVVEAVATFIAY
ENEMLQMLGVWQQGDFSSVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLGLNRTAVLWSGLIIVALITSLVI
VTVGNIPFVGLVVPNIISRLIGDRLRQSLPAVALLGASLVLLCDIIGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAH
AV

Nucleotide


Download         Length: 969 bp        

>NTDB_id=39072 NMBM01240355_RS10730 WP_014582294.1 2108659..2109627(+) (ceuB) [Neisseria meningitidis M01-240355]
ATGACTGCCAAACCTTTTTCCCTCAACCTGACCAACCTCCTGCTGCTGGCGGTATTGTTTGCCGTCAGCCTGTCGGTGGG
CGTTGCCGATTTCCGCTGGTCGGATGTGTTTTCGCTATCCGACAGCCAGCAAGTGATGTTCATCAGCCGCCTGCCGCGCA
CGTTTGCGATTGTGTTGACGGGCGCGTCGATGGCGGTGGCGGGGATGATTATGCAGATTTTGATGCGTAACCGTTTTGTC
GAGCCTTCTATGGCGGGCGCGGGTCAAAGCGCGGCTTTGGGTTTGCTTCTGATGTCCCTGCTGCTGCCTGCCGCGCCTCT
GCCGGTCAAAATGTCGGTTGCCGCCGTTGCCGCGCTAATCGGGATGCTGGTGTTTATGATGCTTATCCGCCGTCTGCCGC
CGACGGCGCAACTGATGGTGCCTTTGGTCGGGATTATTTTCGGCAGCGTGGTTGAGGCAGTGGCGACGTTTATCGCGTAT
GAAAACGAAATGCTGCAAATGCTCGGCGTGTGGCAGCAGGGCGATTTTTCGAGCGTGCTGCTGGGGCGGTACGAGCTGCT
TTGGATTACGGGCGGTTTGGCGGTGTTTGCCTATCTGATTGCCGACCGGCTGACGATTTTGGGACTGGGCGAGACGGTCA
GCGTGAATTTGGGTTTGAACCGGACGGCGGTGTTGTGGTCGGGTTTGATTATTGTGGCTTTGATTACGTCGCTGGTTATC
GTTACGGTCGGCAATATTCCGTTTGTCGGGCTGGTCGTGCCGAACATCATCAGCCGCCTGATAGGCGACAGGCTGCGCCA
AAGCCTGCCTGCGGTGGCCTTGTTGGGCGCGTCTTTGGTTTTATTGTGCGACATTATCGGACGCGTGATTGTGTTTCCGT
TTGAAATTCCGGTCTCTACGGTTTTTGGTGTGTTGGGTACGGCTTTGTTTTTGTGGCTTTTGTTAAGGAAACCTGCTCAT
GCCGTCTGA

Domains


Predicted by InterProScan.

(15-316)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

41.196

93.478

0.385


Multiple sequence alignment