Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NLA_RS04225 Genome accession   NC_014752
Coordinates   824451..824912 (-) Length   153 a.a.
NCBI ID   WP_013448751.1    Uniprot ID   -
Organism   Neisseria lactamica 020-06     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 819451..829912
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLA_RS04200 (NLA_7880) - 819942..821498 (+) 1557 WP_003710595.1 TerC family protein -
  NLA_RS04205 (NLA_7890) surE 821512..822258 (+) 747 WP_003751355.1 5'/3'-nucleotidase SurE -
  NLA_RS04210 (NLA_7900) - 822361..823374 (+) 1014 WP_013448748.1 peptidoglycan DD-metalloendopeptidase family protein -
  NLA_RS04215 (NLA_7920) - 823581..824063 (-) 483 WP_003710586.1 acyl-CoA thioesterase -
  NLA_RS13395 (NLA_7930) - 824216..824377 (-) 162 WP_003714510.1 hypothetical protein -
  NLA_RS04225 (NLA_7940) recX 824451..824912 (-) 462 WP_013448751.1 recombination regulator RecX Regulator
  NLA_RS04230 (NLA_7950) - 824969..825676 (-) 708 WP_013448752.1 phosphoglycolate phosphatase -
  NLA_RS04235 (NLA_7960) - 826073..827338 (+) 1266 WP_013448753.1 Glu/Leu/Phe/Val family dehydrogenase -
  NLA_RS11325 (NLA_7970) - 827396..827578 (-) 183 Protein_824 DUF4198 domain-containing protein -
  NLA_RS04240 (NLA_7980) - 827689..827898 (+) 210 WP_003710575.1 tautomerase family protein -
  NLA_RS04245 (NLA_7990) - 827987..829201 (+) 1215 WP_013448754.1 pyridoxal phosphate-dependent aminotransferase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17703.09 Da        Isoelectric Point: 9.9107

>NTDB_id=39058 NLA_RS04225 WP_013448751.1 824451..824912(-) (recX) [Neisseria lactamica 020-06]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGLLRLKQALAQ
HGIDEETSHKLLPDGTSEKQTAIAVLRKKFKQPAADLKEKQKQARFLAYRGFDADTVQTALKRAWDDGWEEDC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=39058 NLA_RS04225 WP_013448751.1 824451..824912(-) (recX) [Neisseria lactamica 020-06]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAATGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTACGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTTATTGAGGCTGAAACAGGCTTTGGCGCAA
CATGGCATAGATGAAGAGACAAGCCACAAGCTGCTTCCGGACGGTACAAGCGAAAAACAGACCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACAGCCCGCCGCCGACCTTAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGTTTTGATG
CCGATACCGTTCAGACGGCATTGAAACGCGCTTGGGATGACGGCTGGGAGGAAGACTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

90.196

100

0.902

Multiple sequence alignment