Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   F8M43_RS07625 Genome accession   NZ_CP044498
Coordinates   1446892..1447467 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain ms-2     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1441892..1452467
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F8M43_RS07595 dapD 1442079..1442789 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  F8M43_RS07600 dapI 1442859..1443983 (+) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  F8M43_RS07605 ykuS 1444045..1444290 (+) 246 WP_003232382.1 YkuS family protein -
  F8M43_RS07610 mscT 1444327..1445130 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  F8M43_RS07615 ahpA 1445367..1445909 (+) 543 WP_038427629.1 biofilm-specific peroxidase AhpA -
  F8M43_RS07620 ykuV 1445980..1446426 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  F8M43_RS07625 rok 1446892..1447467 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  F8M43_RS07630 cse15 1447508..1448473 (-) 966 WP_038427630.1 spore protein Cse15 -
  F8M43_RS07635 mobA 1448610..1449209 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  F8M43_RS07640 moeB 1449260..1450279 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  F8M43_RS07645 glp 1450297..1451589 (+) 1293 WP_038427631.1 gephyrin-like molybdotransferase Glp -
  F8M43_RS07650 mobB 1451550..1452071 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=390553 F8M43_RS07625 WP_003232378.1 1446892..1447467(+) (rok) [Bacillus subtilis strain ms-2]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=390553 F8M43_RS07625 WP_003232378.1 1446892..1447467(+) (rok) [Bacillus subtilis strain ms-2]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment