Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   F8M43_RS06005 Genome accession   NZ_CP044498
Coordinates   1160414..1160605 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain ms-2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1155414..1165605
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F8M43_RS05975 argF 1156278..1157237 (+) 960 WP_003232980.1 ornithine carbamoyltransferase -
  F8M43_RS05980 yjzC 1157323..1157502 (+) 180 WP_003245356.1 YjzC family protein -
  F8M43_RS05985 yjzD 1157548..1157733 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  F8M43_RS05990 - 1157982..1158716 (+) 735 WP_003245223.1 hypothetical protein -
  F8M43_RS05995 - 1158798..1159355 (+) 558 WP_003232974.1 hypothetical protein -
  F8M43_RS06000 med 1159446..1160399 (+) 954 WP_003245494.1 transcriptional regulator Med Regulator
  F8M43_RS06005 comZ 1160414..1160605 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  F8M43_RS06010 yjzB 1160635..1160874 (-) 240 WP_003232972.1 spore coat protein YjzB -
  F8M43_RS06015 fabH 1161039..1161977 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  F8M43_RS06020 fabF 1162000..1163241 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  F8M43_RS06025 yjaZ 1163317..1164102 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  F8M43_RS06030 appD 1164294..1165280 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=390544 F8M43_RS06005 WP_003224559.1 1160414..1160605(+) (comZ) [Bacillus subtilis strain ms-2]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=390544 F8M43_RS06005 WP_003224559.1 1160414..1160605(+) (comZ) [Bacillus subtilis strain ms-2]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment