Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   F8M43_RS04475 Genome accession   NZ_CP044498
Coordinates   878490..879284 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain ms-2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 873490..884284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F8M43_RS04445 sxzA 874329..875360 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  F8M43_RS04450 yfhB 875475..876356 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  F8M43_RS04455 yfhC 876444..877028 (+) 585 WP_003243940.1 nitroreductase -
  F8M43_RS04460 yfhD 877067..877258 (-) 192 WP_003233561.1 YfhD family protein -
  F8M43_RS04465 yfhE 877325..877435 (-) 111 WP_003223230.1 YfhE family protein -
  F8M43_RS04470 yfhF 877490..878401 (-) 912 WP_038427537.1 TIGR01777 family oxidoreductase -
  F8M43_RS04475 recX 878490..879284 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  F8M43_RS04480 yfhH 879286..879606 (+) 321 WP_029726843.1 YfhH family protein -
  F8M43_RS04485 yfhI 879743..880936 (+) 1194 WP_072692836.1 MFS transporter -
  F8M43_RS04490 sspK 880968..881120 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  F8M43_RS04495 yfhJ 881245..881514 (+) 270 WP_003243789.1 YfhJ family protein -
  F8M43_RS04500 yfhK 881659..882177 (+) 519 WP_029726841.1 SH3 domain-containing protein -
  F8M43_RS04505 spdL 882262..882579 (+) 318 WP_032679045.1 SdpC immunity protein SpdL -
  F8M43_RS04510 ephM 882581..883441 (+) 861 WP_029726839.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=390535 F8M43_RS04475 WP_029726844.1 878490..879284(+) (recX) [Bacillus subtilis strain ms-2]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=390535 F8M43_RS04475 WP_029726844.1 878490..879284(+) (recX) [Bacillus subtilis strain ms-2]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAAATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment